Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1583 ATGGCTTTCTCCGTTTCACTTCGCCCTACCACTTCTCCATCTCACTCACAGCTGTTTTGCTCTGTTAGGTTCAATAGTAGGCGTCGCGGTAATCGATTAGGTTTCGAGTCGGACGGCGGGAGAAGATTTCGTCGTTTACGGAACAGTGCTGGTGTTGGTGTTCGTGTTAGGTCTGTGTTGAACGATAATAGGCCTAGCGTGAACGATTATGGAGCGGCGGAGTCTGCTAGGGTTTTGTTCGAGAGGTTGTTTGACCCGACGCAGAGCCGGTTTAGCGGAGAGGAGCCGGATCTTCGGATTCTGGAATCGGATCTCGAGGCAGCGCTGGCGGCGCTGAAGAAGAAGGAGGATCACTTAATGGAAGCGGAGAGGACGGTGTTGTTGGAGAATAGTAAGTTGAAGCACACGAAGGAGGAGTTGGAGCGGCAAGAGAGTGAGATTGAGGCTGCTAAGGTTAGGTACGAGAAGCTCCAGGAGGAGATGAAAGAAACTACTGGTAGATTGGTTGCTCAGGCGAGCCAGGTCGAGGAGCTGAAGCTTAAGGTTAGAGATCGCGATCACGAGATTGATGCGGTTCAGTATAGTTTGAGGTTGAAAGAAGAGGAAGTGGAGAAAATGAGGGTTGAACTGGAGGTGAAGAGTCAGGAGGCAGCAGTTCTTGACTCAGAACTTAGAGAAAAAGGAAAGCTTTTGGATGAAGCAAATGAAATTATGAATAAACAGAGGGCTGAGCTTGAAAAGTTGAAGAAGGCAGTTGGAGAAAAGGAGGAGGAGATTGAGGTCTTTCTGGATCAGAGGGAGGTTGAGAGGGAGAAACTGAAGGTTGCTGAGGCCAATTTAGAGAAGCAGGCAATGGATTGGTTGTTGGCGCAGGAGGAGCTTAAGAGGCTGGGAGAGGATGCTGCCAGGCATGCTGAGGAGAGTAATCAAACTTTGGATGATTTCAGAAGGGTGAAGAAGCTTCTGAATGATGTGAGGTCTGAATTGGTTTCTTCTCAGCAAGCGTTGGCATCTTCTAGAAGCAAAATGGAAGAGCAAGAGCGGTTGTTGGAACAGCAGCTGTTTGAGCTTTCGGAGCAGAGGGCTAGTGTTATGTCATACATGGAAAATCTAAAGGATGCACAGACTGAAGTGGAGAGTGAAAGAACAAAACTCAGGGTTGCTGAGGCTAGGAACAAAGAGCTTGAACGAGATCTGAAGATGGAAAAGGAGCTTATTAATGGGTTAGAGGAGGTGTTGAAGAAAGAGAGAACTTCTTTAGCACAGGCAGTCACGGAAATGGATTTGCTCCAACAGGAACTGGGGAAAAAAAGTGCTGAATTTAGAGAAACAAGTGCCGTTCTTCAGGTCAAAGAATCAGAGCTCGTTGATGCTAAACTAGAAATCCAGCGTTTGAAATCTGAGAAAGCTTCCCTTCAGGGTATTTTGGAGGAGAAAGACGTGGAGCTTTCCAATGCTAGAAACATGATGGTGGAAGCTAACCAGGAAATCTCTGATCTTAAGATGCTTATGAACAGCAAAGAAACCCAGCTTATGGAAGCAACCAATATGCTAAGGGAGAAAGATGAGCATGTGAAGATAATCCAGAGCGAGTTGAATGATACAAATCAGAAGGCTTTCGAAGCTGAAACAGTGGTTGAAAGAATTTTAGATCTTACAAACAAACTGGTTACTTCGATTCAGGATGAAGACACAAACTCATCGAGACCACTGCTAGATGGTTTGGGTAATCAACTACTTGAGCGGCTATCGGAGGAACCTGCTATTGAAATGAGATGGCAACAAAAAAGACTTGAGAAAGAGCTTGAGTTGGCCAAGGAAAACTTAAAAAAAAAGGAGATGGAGGTTCTTGCTGTACAGAGAGCTCTAACAATAAAAGATGGGGAGCTGAAAATGACTCTTTCAAGATTGGATGCAAAAGAGGAAGAGTTGAAAAAGGTAAGGGAAGAGGTGACAGAAGATACCAATGATCTGAAAAGGCTGTATGCTTTGGCACAGGAGAAAATTGGTGGGGTAAGCTTAGGAGATTTGGTAATTGAGAAACTTCAGCTTGAGGCAGCTCAGCTTGAAGTTGAAGCTGCCACCAATGCACTGGAAAAGCTTGCCGAAATGAGTAGTGAACTTGTGAATAAGGCAATCATGAGTGTTGAAGCTGATAACTGTATCAGTCTTGTGCCAATTGATGACAAAGCCTCCAATTTGATCACAGATATCAGTAAATCTGACTGTTTCTCTGAGGTGAAAGCAGGAGTGGCTCGACTCTCAGCTTTGTCTGAGCAGCTTCTGATGGAGGCAGGTATTGCTCCTGTAAACTAA 2316 0.4529 MAFSVSLRPTTSPSHSQLFCSVRFNSRRRGNRLGFESDGGRRFRRLRNSAGVGVRVRSVLNDNRPSVNDYGAAESARVLFERLFDPTQSRFSGEEPDLRILESDLEAALAALKKKEDHLMEAERTVLLENSKLKHTKEELERQESEIEAAKVRYEKLQEEMKETTGRLVAQASQVEELKLKVRDRDHEIDAVQYSLRLKEEEVEKMRVELEVKSQEAAVLDSELREKGKLLDEANEIMNKQRAELEKLKKAVGEKEEEIEVFLDQREVEREKLKVAEANLEKQAMDWLLAQEELKRLGEDAARHAEESNQTLDDFRRVKKLLNDVRSELVSSQQALASSRSKMEEQERLLEQQLFELSEQRASVMSYMENLKDAQTEVESERTKLRVAEARNKELERDLKMEKELINGLEEVLKKERTSLAQAVTEMDLLQQELGKKSAEFRETSAVLQVKESELVDAKLEIQRLKSEKASLQGILEEKDVELSNARNMMVEANQEISDLKMLMNSKETQLMEATNMLREKDEHVKIIQSELNDTNQKAFEAETVVERILDLTNKLVTSIQDEDTNSSRPLLDGLGNQLLERLSEEPAIEMRWQQKRLEKELELAKENLKKKEMEVLAVQRALTIKDGELKMTLSRLDAKEEELKKVREEVTEDTNDLKRLYALAQEKIGGVSLGDLVIEKLQLEAAQLEVEAATNALEKLAEMSSELVNKAIMSVEADNCISLVPIDDKASNLITDISKSDCFSEVKAGVARLSALSEQLLMEAGIAPVN* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1583 771 Coils Coil 677 711 - -
Vra6g1583 771 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 48 767 - -
Vra6g1583 771 Coils Coil 588 622 - -
Vra6g1583 771 Coils Coil 196 218 - -
Vra6g1583 771 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 48 767 - -
Vra6g1583 771 Coils Coil 448 510 - -
Vra6g1583 771 Coils Coil 630 668 - -
Vra6g1583 771 Coils Coil 340 440 - -
Vra6g1583 771 Coils Coil 224 283 - -
Vra6g1583 771 Coils Coil 98 174 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1583 - - var:108336972 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1583 6 31233656 31236822 Vra6g1583 6 31233656 31236822 ECH