Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1576 ATGAGGAGAGAGAGAACATTGTTGGTGGTACTGCTACTTATTCTAATCCACCATATTTCTGCTACCAAGGATCACCAAAAACACCTTTGTCCCCCTTCTTCCTGTGGCCACATCCCCAACATTACTTATCCTTTTCGATTACAAGGCGACCCAGAGAATTGTGGTGACGAAAGGTACGAGCTTGGTTGTCAGAATAATGTTACTGTGTTGTATCTGCACTCTATACAATACCATGTACAAGCAATCAACTACGACAACTACACCGTGAGAGTGGTTGACCCTGCACTTCAACACCACAACTGCTCCTCCCTTCCTCTCCGTTCCCTCTCTCGCTCCAATTTCTCTGATACTTACACGCACCGCATGGGTCCATACCAAGCCTCTTATGATAATATGGAATCTCTGAGTTTCGAGCATATAGTGTTTCTGAACTGTAACCATTCGGTGAGAGAGAACGGAAAGTATGTGGAAAGTGGTGAGTGCGTGAAGTGGGACTCAAAGGGCTATTCATATGCTGTTGTTGGTGACCTATATGCTGAGGACTTAGAAGTTGGGTGTGACGTGAAGCTTGTTGCTCCCACATCGTTCAGGACTTTGAGTTACCATTCATACGGTGCCATTCATAGGGCTCTCGCCTATGGATTTGAGATCTCTTGGCTAAACCTCGCCTGTCAGAATCATTGTCATGAAGATTTTTGCGATTTCGACTCTTCTAGCCAGAAGCTTGTTTGCTATGAACAATCCTTATTCCAGTGGTTAAAGAAGTGGTTAAAGACGTTAGCTGATAAGGGAGAATTGTACATTGAAGATGATTGGATGTGCTAA 825 0.4424 MRRERTLLVVLLLILIHHISATKDHQKHLCPPSSCGHIPNITYPFRLQGDPENCGDERYELGCQNNVTVLYLHSIQYHVQAINYDNYTVRVVDPALQHHNCSSLPLRSLSRSNFSDTYTHRMGPYQASYDNMESLSFEHIVFLNCNHSVRENGKYVESGECVKWDSKGYSYAVVGDLYAEDLEVGCDVKLVAPTSFRTLSYHSYGAIHRALAYGFEISWLNLACQNHCHEDFCDFDSSSQKLVCYEQSLFQWLKKWLKTLADKGELYIEDDWMC* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1576 274 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
Vra6g1576 274 PANTHER OS01G0113900 PROTEIN 3 230 - -
Vra6g1576 274 PANTHER OS01G0690200 PROTEIN 3 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1576 Vra-Chr6 31125164 31132992 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1576 8 245 Receptor kinase-like Gene Family AT5G38260 23.237 4.83e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1576 - - vra:106763727 423.705