Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1561 ATGAGAAGAATATGGAATCTTCTCTCCAAATCCAAACAACTAGCAGCGTTTTCAAGCCCAGCCTCCAAGTTCCGCGTCACTGCGTTTTGCTCTTATTGCGATCAATCGTATCGGCAGAACCGTCCAGGGCCGCTCGTTCAGTACAAAAGTCTAGTTGATCAAGGGAAGTTGCAGTATGATCCTTACCAAGAGAGTGTTGCTTCAGAGCTTGAGAGTTTGCTTGCCAGGTTGGAGCAGTATGAGAAAGATATGGAGGAGTATCATGTGAATCTAGCTAATTGGGAGAAGCAGCGGGAGAATGAGCGGCGGAGACTTCTTAAGGAGGAAGTTGAGCTGCACCAGAAGGATGAGGACTGGTGGAAGCGGTTGAACAATAAGCTTACTGAAAGATGGACATCCCGGAAAAGACCTGCGAATATGGAGCCAGGGGTGGGAAAATGGGTATCGTATCTTAAACGTGAGAAGAAGTTGGATTCACTTGTTGGTCGTCGTCCAACTGCTCCCCCAGCTCCTAAAGGACTTTACATATATGGCAATGTTGGCAGCGGGAAGACAATGTTGATGGACATGTTCTATAGTTCTACTAAAGGAATTGTAAAACATCGAAGAAGGTATCACTTTCATGAGGCCATGCTCAGAATTAATGAACATATGCACAAGATATGGAAGAACCAAATGGAAGAGAAGCCTTTGCAATCGGGTGTTGCTGGTTGGATTATGAGTCTTCCATTTGATATGAAAGCTAAGGAGTGGTTGGCTGCTGAGGAAAGATACAAGCAAGAGATGCAAATAAAGAACATTCTCCCAGCTGTAGCAGATAAATTTTTCCTGGATGGAGAAGAAAATGAAAAAGGAGCTAGCATTTTGTGCTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGCAGTGGAACTATAATTGTGGCTACCAGTAATCGAGCACCAAGCGACTTAAATGAGGCTGGTATGCAAAAAGAAATATTTCAGAAACTTGTCTCCAAATTGGAAGACCATTGTGAGAAAGTATTGATAGGGAGCGAAATTGACTACCGTCGTTTTATAGCACAAAAATCAGAAAACCAGGTGCACTTTTTCTGGCCTATTGGAAAGGAAGCAACCAATGAATTTGAGAAAAAGTGGCATGATGTAACAAGCAGATTGGGAGGAAGAATAGTTTCCAACACCACCATCTCAGTGATGTTTGGAAGGACACTTGAGGTTCCCAAAAGCTTTGATGGAGTTGCACGCTTTACATTTGAATATCTTTGTGGTCGTCCGTTGGGTGCAGCAGATTATATTGCAGTTGCCGAAAACTTTCACACTGTGTTCATATCTGATATTCCAGTAATGAGTATGCGTATCCGTGACAAGGCACGGAGATTTATTACCCTTATTGATGAGTTATACAATCATCATTGCTGCCTATGTTGTTTGGCATCCTCTTCAATTGATGAATTATTTCAAGGAACCGAGGAGGGCACACTTTTTGACTTGGAAAGTTTCCAGTTTGAAACAGAGATTGATGGTGGGAAACTTCGTCGTAATGTCTTGGCAGAAGGCAGGGTGAGCTCAGCAGGTGCCCCTTCTAGTATCACATCCATACTATCTGGTCAAGAAGAGTTGTTTGCTTTTCACAGAGCTGTCTCACGGCTGATTGAAATGCAAACTCCATTATACTTGGATGGAGTTAGTAATTTCCACCCCTATTTTCAGAGGCAATATAAACAGTCACAACAATTGTGA 1779 0.4255 MRRIWNLLSKSKQLAAFSSPASKFRVTAFCSYCDQSYRQNRPGPLVQYKSLVDQGKLQYDPYQESVASELESLLARLEQYEKDMEEYHVNLANWEKQRENERRRLLKEEVELHQKDEDWWKRLNNKLTERWTSRKRPANMEPGVGKWVSYLKREKKLDSLVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSSTKGIVKHRRRYHFHEAMLRINEHMHKIWKNQMEEKPLQSGVAGWIMSLPFDMKAKEWLAAEERYKQEMQIKNILPAVADKFFLDGEENEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPSDLNEAGMQKEIFQKLVSKLEDHCEKVLIGSEIDYRRFIAQKSENQVHFFWPIGKEATNEFEKKWHDVTSRLGGRIVSNTTISVMFGRTLEVPKSFDGVARFTFEYLCGRPLGAADYIAVAENFHTVFISDIPVMSMRIRDKARRFITLIDELYNHHCCLCCLASSSIDELFQGTEEGTLFDLESFQFETEIDGGKLRRNVLAEGRVSSAGAPSSITSILSGQEELFAFHRAVSRLIEMQTPLYLDGVSNFHPYFQRQYKQSQQL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1561 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 347 IPR027417 -
Vra6g1561 592 Gene3D - 163 364 IPR027417 -
Vra6g1561 592 PANTHER AFG1-LIKE ATPASE FAMILY PROTEIN 35 590 - -
Vra6g1561 592 Pfam AFG1-like ATPase 156 503 IPR005654 GO:0005524|GO:0016887
Vra6g1561 592 PANTHER ATPASE N2B 35 590 IPR005654 GO:0005524|GO:0016887
Vra6g1561 592 Coils Coil 63 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1561 Vra-Chr6 30911389 30925794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1561 - - mtr:MTR_1g012370 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1561 6 30911389 30925794 Vra6g1561 6 30911389 30925794 ECH