Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1553 ATGGTAACAAAGCATGCATATAAGGCCAAACCTCTCCCTCCACTGATCCACAATGCTTTTTCTCCCTTCTTTCATCTTCCTCCCTTTTCACCTCATTATTATCCCAAAATTGCAGAGTTTCTCATCCCAGAAAACATGAAGGGAAGGTTCCTATTTCTGTCGGTGCTCTTGTATTCCACCTTTCATGTCTCCTTCTCCATTATCGATGGACTGGTGGCGAACGGGAACTTCGAGTTGGGTCCGAAGGCGTCGGATCTGAAAGGAACGGTGGTGGTGGGAGGCAGCAAGTCGATTCCAGAATGGGAGATATCGGGGTTCGTGGAGTACATAAAGTCGGGGCAGAAGCAGGGGGACATGCTGCTGGTGGTGCCGGAGGGGGCGTATGCGGTGCGGCTGGGGAACGAGGCGTCGATAAAGCAGAACATAAAGGTGCTGAAGGGGATGTACTATTCAATCACGTTCATGGTGGCTCGGACGTGCGCGCAGGAGGAGAGGATTAACATCTCGGTGACGCCGGACTGGGGAGTGATACCGATCCAGACGTTGTACACGAGCAGCGGGTGGGACCCGATTGCGTTCGGGTTCAAAGCGGAGAGCGAGACGGTGGAGATGCTGATTCACAACCCTGGCAAGGAGGAGGACCCCGCCTGTGGGCCCCTCATTGATTCGGTTGCTCTCAGGACTCTCTATCCTCCCAGACCTACAAACCAGAACCTATTGAAGAATGGTGGATTTGAAGAAGGACCGTATGTGTTTCCGAACTCATCATGGGGTGTGATAATCCCACCGAACATTGAGGATGACCATTCTCCTCTGCCAGGGTGGATGGTGGAGTCCTTGAAGGCAGTGAAGTACATAGACTCAGAGCATTTCTCAGTCCCTCAGGGCACAAGAGCAGTGGAGCTAATAGCAGGAAAAGAGAGTGCCATTGCTCAAGTGGCAAGAACAATCCCTGGCAAAACCTACGTGCTCTCATTCTCTGTAGGGGATGCCAGCAACTCCTGCGAAGGCTCCATGATTGTGGAAGGATTTGCAGGCAAAGACACCATCAAAGTGCCCTACGAATCCAAGGGCAAAGGAGGGTTCAAACGTGCAGCCCTTAAGTTTGTGGCTGTTGGACCAAGAACAAGAATCATGTTCCTCAGCACCTTTTACACTATGAGAAGTGATGATTTCTCTTCACTCTGTGGACCTGTGGTTGATGATGTCAAGTTGATAAGCCTGCGTAAACCATAA 1236 0.5121 MVTKHAYKAKPLPPLIHNAFSPFFHLPPFSPHYYPKIAEFLIPENMKGRFLFLSVLLYSTFHVSFSIIDGLVANGNFELGPKASDLKGTVVVGGSKSIPEWEISGFVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQNIKVLKGMYYSITFMVARTCAQEERINISVTPDWGVIPIQTLYTSSGWDPIAFGFKAESETVEMLIHNPGKEEDPACGPLIDSVALRTLYPPRPTNQNLLKNGGFEEGPYVFPNSSWGVIIPPNIEDDHSPLPGWMVESLKAVKYIDSEHFSVPQGTRAVELIAGKESAIAQVARTIPGKTYVLSFSVGDASNSCEGSMIVEGFAGKDTIKVPYESKGKGGFKRAALKFVAVGPRTRIMFLSTFYTMRSDDFSSLCGPVVDDVKLISLRKP* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1553 411 SUPERFAMILY Galactose-binding domain-like 70 227 IPR008979 -
Vra6g1553 411 PANTHER OS02G0527500 PROTEIN-RELATED 51 411 - -
Vra6g1553 411 Pfam Protein of unknown function (DUF642) 70 227 IPR006946 -
Vra6g1553 411 Pfam Protein of unknown function (DUF642) 238 405 IPR006946 -
Vra6g1553 411 Gene3D - 234 406 - -
Vra6g1553 411 Gene3D - 69 227 - -
Vra6g1553 411 PANTHER PLANT/F18G18-200 PROTEIN 51 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1553 Vra-Chr6 30718956 30726222 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1553 - - gmx:100813910 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1553 6 30718956 30726222 Vra6g1553 6 30718956 30726222 ECH