Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1545 ATGGGTGACAAGAAGAAAAAAGCTCAGATGTTTGTGAAACTAGTGTCTGCTGCCGGCACTGGATTTTTCTATGTAAAGAGGAAGCCAAGGCAGTTCACAGAGAAGCTTGAGTTTCGAAAATTTGATCCTAGGGTTAATCGTCATGTTCTGTTTACAGAGGCTAAGATGAAGTAA 174 0.408 MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKFDPRVNRHVLFTEAKMK* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1545 57 TIGRFAM rpmG_bact: ribosomal protein bL33 4 57 IPR001705 GO:0003735|GO:0005840|GO:0006412
Vra6g1545 57 PANTHER 54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL 1 57 - -
Vra6g1545 57 PANTHER 54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL 1 57 - -
Vra6g1545 57 Gene3D Ribosomal protein L33 3 57 IPR038584 -
Vra6g1545 57 SUPERFAMILY Zn-binding ribosomal proteins 4 55 IPR011332 GO:0006412
Vra6g1545 57 Pfam Ribosomal protein L33 12 55 IPR001705 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1545 Vra-Chr6 30590076 30590888 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1545 K02913 - gmx:100811038 116.701