Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1544 ATGGCCACAGAAGTAAGGTACATCTGCAAAAGAACTGTGGTGAGCACCAAGGCAGTGGAGCCAGGAAAGTACTTTCCCTTATCAGCTTTGGATCATCACATGCAGCACAACCACATTAGGTTGGTCTGCTATTACCAAGGTTCAGGAGAATCATTGGAGCTTGGAGAAATAACCAAGAAGTTGAGAGAGAGTTTGTCAGAAATGCTGACCCATTTCCCCATGGTGACTGGAAGGTTGACAAGAGATGAAATAGGGCATTGGAAGATCAAATGCAATGATGCAGGACTGAGAGTGGTGGAGGCCAAAGCCAAAGGAACTCTGCAACAATGGCTACCAAATCTTTATAGAGAAAAGGAACTCCAACTTGTGCATTGGGAGGACATGTTCCACAAACCTTATTATTGGTCCACTTTTTATGTTCAGCTGACTGAATTTGAAGAAGGTGGATTAGCAATAGGCCTAAGCTGTGTTCATCTCTTGGCAGATTCCATTTCTGCAATCTCATTCATGAAAGCATGGGCTGATATTTCAATGGGTGATAAAATCATTACTCCTCCATTATTCCACCCTTTACCTCTCACAAGACATGCAAACACAAACCCTAACCCTAATGATCACCACCACATGGAGTTAATACACCACTACAAATCTATAATTGGAAAACCTATTTCCTTCAAGGAAGCAAGGTACACTACCATTTCCCTGGGCTTCTCAGCCCAAATGGTTAAGGCCTGCATCTCCATGGCCCAATCCAACAGCCCAATAACACCCTTTGAGGCCCTAGCAGCCTTGTTTTGGATCTCTTTGAGCAAAGTCAGGGGCTTGAGAAATGGGCTTGTTGACATGTCCATATGCTTGGACATGAGAAAAGTGTTGGGCCTGGACACTGGGTTCTTTGGGAACTGCATGGTGTATAATAAGGTCCATGAAGTAGAAGGGGAGGATGAGAAATTGAAATTTGGAGAAGCTGTCAGAGCAATAAGTGATGTTGTGGGTAGAATGGAGTATAAGGGTGTGATGGATTTGATTGAGTGGCTAGAAAATGGTGATGATGTGAATTCAGCTACCATGATGAACGGCCATGATCTTGTTTGTACTAGCTTGGAGGGTGTGGAGCCTTACTTTGTGTTTGAAAATGGTTTGAAAGCCATTCATGTTTCTTGTTATGTGGAACCAGTTTTGGGAGAAGGACAGATTCTGATACTCCCTGGCCCACCTGGGGAGGGTCCCTTAAGCAGAGTGGCTATGGTGACCTTAAGAGAAGAGGAAGCAACTAAACTTTGTGAGGTTGAACTTATCTCACAATTCTCTCCTACTATTCTAATGAAATTTCAATGA 1338 0.435 MATEVRYICKRTVVSTKAVEPGKYFPLSALDHHMQHNHIRLVCYYQGSGESLELGEITKKLRESLSEMLTHFPMVTGRLTRDEIGHWKIKCNDAGLRVVEAKAKGTLQQWLPNLYREKELQLVHWEDMFHKPYYWSTFYVQLTEFEEGGLAIGLSCVHLLADSISAISFMKAWADISMGDKIITPPLFHPLPLTRHANTNPNPNDHHHMELIHHYKSIIGKPISFKEARYTTISLGFSAQMVKACISMAQSNSPITPFEALAALFWISLSKVRGLRNGLVDMSICLDMRKVLGLDTGFFGNCMVYNKVHEVEGEDEKLKFGEAVRAISDVVGRMEYKGVMDLIEWLENGDDVNSATMMNGHDLVCTSLEGVEPYFVFENGLKAIHVSCYVEPVLGEGQILILPGPPGEGPLSRVAMVTLREEEATKLCEVELISQFSPTILMKFQ* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1544 445 Gene3D - 221 430 IPR023213 -
Vra6g1544 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 443 - -
Vra6g1544 445 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 443 - -
Vra6g1544 445 Gene3D - 1 211 IPR023213 -
Vra6g1544 445 Pfam Transferase family 10 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1544 Vra-Chr6 30583495 30585046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1544 12 427 Acyl Lipid Metabolism Gene Families AT4G13840 26.316 1.35e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1544 - - gmx:100804090 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1544 6 30583495 30585046 Vra6g1544 6 30583495 30585046 ECH