Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1534 ATGGCTTCCATGAATTTATTCACCACCATTTCCCTCGCCGCCGACAGCCGGAATTCCACTGCCTATTTTCCCCGGAGGCGAGCCAACTCCGTCGCTATGGCCGCCACTTCGCCGGAATCTCCTCCAGAAATAGAGCTCGAATTCATCGGGCCGAAAGCGGAGAGTGATGGAAAGTATCCGGTGGAAAAAGCAAAAGCGATAAGCGGGGAGAAGCTGTTGAGGAACATCATGACGGATAACAAGATCGAGCTTTACGCCACCTACGGGAAACTGATGAACTGCGGAGGAGGAGGTAGCTGTGGAACTTGCATCGTAGAGATTATTGAAGGAAAAGATCTTTTAAATGAAAGAACCAATACGGAACTCAGATATCTCAAGAAGAAACCTGAATCTTGGAGGTTGGCTTGTCAAACTATTGTTGGAAACAAAGAAAACTCTGGCAAGGTTGTTGTTCAAAGGATTCCTCAGTGGAAGAAGTAA 480 0.4729 MASMNLFTTISLAADSRNSTAYFPRRRANSVAMAATSPESPPEIELEFIGPKAESDGKYPVEKAKAISGEKLLRNIMTDNKIELYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWKK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1534 159 Pfam 2Fe-2S iron-sulfur cluster binding domain 91 140 IPR001041 GO:0051536
Vra6g1534 159 SUPERFAMILY 2Fe-2S ferredoxin-like 68 142 IPR036010 GO:0051536
Vra6g1534 159 Gene3D - 53 158 IPR012675 -
Vra6g1534 159 PANTHER FERREDOXIN/ADRENODOXIN 30 158 IPR001055 GO:0051537|GO:0140647
Vra6g1534 159 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC 30 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1534 Vra-Chr6 30372646 30378000 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1534 - - gmx:100807125 277.33