Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1532 ATGCTCAAGAAAATCCTCAGCAAGCTTCCTCGGAAGTCGTTGAAACCCGACTCGGACGAGTCGTCTTGGGGTGACTCCGGGCTTTCATCCGATTCGCCACGCGTTGCCGGTAAAAGCCAAAGACCACATGGCGGCAGTTCCACCGCTGCGAAGCGAGCTTCGTCATCAGCGGTGTTTCCGGCGAGCATGGTGTCCGGATTTGAACCTTTGGTGCCGTTTAAGGATGTTGCTAATGCTGAGAAGATGAACCTGTTCGTGAGCAAGTTGAGCCTTTGTTGTGTAATGTTTGATTTCAGTGACCCTAGTAAGAGCGTTGCAGATAAAGATGTGAAAAGAAAGACTTTGGTTGAGCTTGTTGATTTTGTGGCCTGTGGAACAATGAAGTTTAGTGAGCCTGCTATCCTTGCTTTGTGTAGAATGTGTGCTTTCAATTTGTTTAGAGTTTTCCCTCCTAATTATAGGACAGGTGGTGGTGAGAATGATGATGATGAACCTATGTTTGATCCTGCTTGGCCACATTTGCAACTTGTGTATGAATTGCTGCTCAAGTTTATATCTTCTTCGTGCCTTGATGCGAAGGTGGCGAAAAAGTATATTGATCATTCGTTTATTGCTAGATTGCTTGAGTTGTTTGATTCGGAGGATCCTAGGGAAAGGGATTGCTTGAAGGCAATTCTGCATAGGATTTATGGGAAGTTCATGGTGCATAGACCCTATATTCGGAAATCTATTAACAACATATTTTATCGGTTTGTGTTTGAGACTGAGAAGCACAGTGGGATTGGTGAGTTGTTGGAAATTTTTGGGAGTGTGATTACTGGGTTTGCTTTACCCTTGAAAGAGGAACATAAAATCTTCTTATGGAGGGTTTTGGTCCCCTTGCACAAGCCGAAATCAATTGGGGTCTACTTTCAGCAATTGTCCTACTGTGTTATGCAGTTTATAGAAAAGGAGCCCAAGTTAGCGAGCATTGTCATAAGGGGTTTGTTGAAATATTGGCCCGCAACAAATAGTCAGAAAGAGGTGATCTTTCTGGGTGAACTGGAAGAAATTTTGGAAGTAATTAACATGGTAGAGTTCCAGAGGATCATGGTTCCTTTGTTTTGGCGTATTGGATGCTGCATAAACAGCTTACACTTTCAGGTAGCTGAAAGGGCCCTTTTCTTATGGAACAATGATCACATTGTCAACTTGATTGCACATAACCGGCAAGTGATCCTGCCCATCATCTTTCCAGCTTTAGATAGGAATGTTCAAGGCCATTGGAACCCGGCAGTTGTCAACCTAACTCACAATATTAGAAAGATGTTTTTGGAGATGGATGAAAAGCTCTTCATTTATTGCCATAATCACTTTAAGGAGGAAGAAACAATCTTGACCTCTGCAGCAGAGAAGCGGAAGGAGGCATGGAAACAACTAGAGCATGCCGCCAGTCTCAGGCCTGTTACTGGAAATACTGCAGTGTTAGTGTCCTGA 1476 0.4356 MLKKILSKLPRKSLKPDSDESSWGDSGLSSDSPRVAGKSQRPHGGSSTAAKRASSSAVFPASMVSGFEPLVPFKDVANAEKMNLFVSKLSLCCVMFDFSDPSKSVADKDVKRKTLVELVDFVACGTMKFSEPAILALCRMCAFNLFRVFPPNYRTGGGENDDDEPMFDPAWPHLQLVYELLLKFISSSCLDAKVAKKYIDHSFIARLLELFDSEDPRERDCLKAILHRIYGKFMVHRPYIRKSINNIFYRFVFETEKHSGIGELLEIFGSVITGFALPLKEEHKIFLWRVLVPLHKPKSIGVYFQQLSYCVMQFIEKEPKLASIVIRGLLKYWPATNSQKEVIFLGELEEILEVINMVEFQRIMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALDRNVQGHWNPAVVNLTHNIRKMFLEMDEKLFIYCHNHFKEEETILTSAAEKRKEAWKQLEHAASLRPVTGNTAVLVS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1532 491 MobiDBLite consensus disorder prediction 20 51 - -
Vra6g1532 491 MobiDBLite consensus disorder prediction 1 51 - -
Vra6g1532 491 SUPERFAMILY ARM repeat 83 473 IPR016024 -
Vra6g1532 491 PIRSF PP2A_B56 8 489 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra6g1532 491 Gene3D - 78 476 IPR011989 -
Vra6g1532 491 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 477 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra6g1532 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra6g1532 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1532 Vra-Chr6 30348551 30352256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1532 K11584 - gmx:100781390 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1532 6 30348551 30352256 Vra5g1147 5 17947177 17950338 PCT