Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1530 ATGAGGCCGCAATCGTCGTCTTTGAATCCATATGCAGCCTCATATGTTCCTCTCTCTAAAAGGGGGGCAGACGGTAGAACTACTTTTACAGAAATAGATTCCAAGAGTTATGATGGGAGTTTTTGGTTTCAGAATCGTCAGGATGCAACAAATGATCAGCAACTCACCATTGCTAGTTCAGAAAGGCTATTTAAACCTGATGCTTTTCCGACAAAAAGCCAGCCTGCCTCAAGTTCTTACACTTCATCATCTCAGAATGTGGCAGAGGTGGCAGAAAATCAGATGCTAGCCGAAGAACTGGATATGGATTTGGAATATCTTAGGATTACATTTCCTGGCATATCTTATCAATCCCTTGTAGATGTCTATAATGTAAACAGTGGAGACTTGGATGCTGCTATTGACATGCTCAGTCAACTTGAGTTAGAGGGAGATGAATCTTCTGGAACTCTTCCAGAGACACTTGATATTGGTGATGTTTCAGAATCTGGATTACCGGCTGATTCTACTTCCTTAAAGCAGAAGAATGTAGCAGAGGAAACCAGCACTTCGTCTAGTCACATGGCATCAGGCGATGTCTTATGA 585 0.4222 MRPQSSSLNPYAASYVPLSKRGADGRTTFTEIDSKSYDGSFWFQNRQDATNDQQLTIASSERLFKPDAFPTKSQPASSSYTSSSQNVAEVAENQMLAEELDMDLEYLRITFPGISYQSLVDVYNVNSGDLDAAIDMLSQLELEGDESSGTLPETLDIGDVSESGLPADSTSLKQKNVAEETSTSSSHMASGDVL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1530 194 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6 1 187 IPR038981 -
Vra6g1530 194 MobiDBLite consensus disorder prediction 71 85 - -
Vra6g1530 194 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6 1 187 - -
Vra6g1530 194 MobiDBLite consensus disorder prediction 164 194 - -
Vra6g1530 194 Gene3D - 81 149 - -
Vra6g1530 194 MobiDBLite consensus disorder prediction 144 194 - -
Vra6g1530 194 MobiDBLite consensus disorder prediction 66 85 - -
Vra6g1530 194 CDD CUE_CID7_like 101 143 IPR041806 -
Vra6g1530 194 ProSiteProfiles CUE domain profile. 99 142 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1530 Vra-Chr6 30294452 30296975 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1530 - - gmx:100781938 288.115