Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1529 ATGAGTCTGAAAAACCATACCTTGTTTCTGGGAACAAGTCTTCATGGCACTTGGGAAAGCGGCACCAGCAAGAGAAACCCTTTTCTTTTGGAGAGAAGGAAGTTGCCGCAGAAGGGTCTTTGCAATTGCACGTGCTGCGTGTCCCCAAGACGGTGCCGTTTGGTAAGCCAAGCGTTACGGCTTTCAGCTTTTTCTGGGCAAAACGCGGGGTTTTTGGGAAAAGACTTGATTTTGAGAGGTGGGTCGAGGTTAGAATGTGCCAGGGAACCTTATTTTAGGAGTGAGGCTTTGAGCAGTTATTTGACACCATTGTGGAAAGAGGGGCTGCTTTTGATAAGGGCTTCTGCTTGCACTGCTGTTGTATCTGGAGTGTGCATGCTGGTGTGGTATGGCCAGAATAAAGCAAAGGGTTTCATTGAGGCCAATTTGTTGCCTTCTGTTTGTTCAGTAATCAGTGAGCACATTCAGCGTGACCTTGTGTTTGGCAAAGTTCGGCGACTTTCGCCGTTGAGCATTACTTTGGAATCTTGCTCATTTGGGCCTCACAAGGAGGAGTTTTCGTGTGGCGAGGCTCCCACGGTGAAGCTTCGTCTCCGCCCCTTTGTGAGTTTGAGGAGGGGAAAGTTGGTGATTGATGCGGTTTTGTCGCATCCAAGTCTCTTAGTAGCACAGAAGAAGGACTTTACTTGGTTGGGAATACCCTTCAATGAAGAAGTCAGGGAGAGAAGTTTTTCGGCTGAAGAAGGCATAGATTATCGTACAAGAACAAGGAGGCTTGCACGAGAGGAAGCCTTGGCTCATTGGGAAAGAGAAAGGGATGATGCGGCTAAGGAAGCTGCTGAGGTGGGGTACTTTGTTTCTGAGAGGAGTTGTGGTGAGTCCCAAGGTGATGATGGTTTAAAGGAGATGGAAACTCGTTCCGTGGAGTCAACTGCATCTGCGCCCTTTTTCTGCATGAATGATGGGAAGCACGATCATAGGTTGATGGACAAAGGTGTTAATTATGATACGAAGCATGCAGCTTTGGAAAAATCATTTGGAGTTACATTTCCTGCATCCGGACTTCGATTTTGGTCCAGAGTAATATCCGGGCCTAGGAAACACAAGTTTAAGAGGAAGGCTAATGGGGGTAGCATCTTTGCATCTGGTGTTGCTACCAAAAAGAGAATGTTTGAACGTAGTGCATCAGCTGCTCATGCATACTTTTGTAATCAATCACAATGGAAATTTGGGGAGCCTTTGTCGCCTTCTGAATGTTATCATTTTATGAGTCATGATATGCATTTGGTGAAAAGTGAGGTTGACAGAAATGCCAAACCTGTTGTTGGTGATGAAAAACGAAGTGATGAAAAAAGAAGCGATGATAGCCAAAGTGTAACACAATTCAAAGATCTGGCATTGCCTCATTCAGTGAATGAAAATATTGGCATTCAATCGGATTACTTAAACTTAGTTTGTGATCCAACATTACACACAAGAGAGGGTGAATTTGAAAATTTGCAATCTAGTGATGATGTTGCAGAACCGGCTAATCCAAATGGTATTAAAGAGAAAAATGAGGAGTTTGTACCATATGTTGCTGCCAGTCATCTGGATGATAATGACAGCTCTTCAGGGGGGCAACGGGGTTTGACATCTGAAAATTTGAGTTTTGTGAAGCCTAACTCTCAGTTGGAAACCTATTTTCAAAATCCATTTGAGCTCTTGCTTGTGAAATTTGACTTAACATCAATTTTAAGAAATATGGAAGAGTTGACATCTTGGTTTCTTTCTGGTCCCTTTGCAAAGTTGAAGTCTGTCCTGGGTCTGAGAGTTGAAGATATTGTTTCCGAACATGCTGATGGGATAGATTTTGTGCAGTCCGAAGGTGTTACAAAGGTTCTGCCTATTACATTGGATTCAGTTCATTTCAAAGGTGCAACATTGATGCTGCTTGCATATGGTGACAAGGAAGTTAGGGAGATGGAGAATGTCAATGGACATGTAAAGTTCCAAAATCACTATAGTCGCATACATGTGGATCTGAGTGGAAATTGTAATACTTGGAGATCAGATCTTATATCTGAAGATGGAGGCTGGTTGTCTGCCAATGTTTTTGTTGACACTATTGATCAGAATTGGCATGCTAATTTAAAAATCGATAATCTTTTTGTCCCGCTGTTTGAAAGGATCCTTGAAATTCCAATTATCTGGTCTAAAGGGAGGGCTAGCGGCGAGGTTCACCTGTGCATGTCCAAGGGGGAGACTTTTCCAAATTTTCATGGACAACTTGATGTGATAGGGTTGGATTTCCAGCCATTGGATGCTCCATCATCTTTTTCAAACATATCAGGGAGTTTATGTTTTCGTGGTCAAAGAATATTTTTACACAATGCAAGTGGCTGGTTTGGCAGTGTTCCTTTAGAAGCATCAGGAGACTTTGGCATTCATCCTGAAGAAGGAGAGTTTCATCTTATGTGTCAGGTTCCTGGTGTTGAAGTGAATGCTTTGATGAGAACCTTTAAGATGAAACCTCTTCTCTTCCCGTTGGCAGGATCAGTGACTGCTCTATTTAACTGTCAAGGCCCACTGGATACACCTGTATTTGTTGGCACTGGAATGGTTTCTAGGACGTTCTCTTATTTACAAACTGATACCACTGCATCTGTAGCATCTGAAGCACTTGCTACAAGTAAGGAAGCTGGAGCACTGGCAGCATTTGATCGTGTACCATTTTCCTATGTATCTGCTAATTTCACTTTCAACACCGATAACTGTGTTGCTGATTTATATGGAATTAGGGCATGCCTTATAGATGGTGGTGAAATTCGAGGGGCTGGGAATGCATGGATTTGCCCAGAGGGTGAGGAGGATGAGACCGCGATAGACGTCAATTTTTCTGGAAGTTTGGCCTTTGATAACATTGTGCTTCGTTATATACCAAGTTATTATCATCAGATGCCACTTAAATTAGGAGTGTTAAATGGTGAAACAAAACTTTCAGGATCCCTTTTACGACCAAGGTTTGATATAAAGTGGACTGCACCTACAGCTGAAGGGTCTTTCAGTGATGCTCGAGGAGACATCATAATCTCACATGATTTTATTACTGTGAATTCTGCTTCAGCTGCATTTGATCTGTATACGCGAGTTCAAACATCTTATCCTGATGATTTTCATCATAAAAAAGAGTTCAATATTCCAAGAGCCATCCCATTTACCATTGATGGAGTTGAGTTGGATTTACGTATGCGTGGGTTTGAATTCTTCAGCTTGGTTTCTGCATACACTATGGATTCCCCAAGGCCTTTGCATTTGAAAGCGGCTGGAAGAATAAAGTTTCAGGGAAAGGTTTTAAAACCAATTGGCAATATTACAGAACAAAATCTTGAGATGACAAGGCAGAATGTACAAATGTTAGATAAAGGAATTGTAGATAGTCTTGTTGGCGAGGTTTCAATCTCTGGTCTCAAACTGAACCAACTTATGCTTGCCCCTCAGTTGTCTGGGTTGTTGAGAGTTTCTCCCAAGTGTATTAAGTTGGATGCATCTGGTAGACCAGATGAAAGTCTTGCAGTGGAGTTTGTTGGGCCGCTGCAGCCCAGTAGTGAAGATGGTCTGCAAAGTGGGAAATTGTTGTCCATTTCCCTTCAGAAAGGGCAATTGAGGGCTAACATTTGTTTTCAACCATTTCATTCTGCCAACTTGGAGGTACGGCATTTTCCACTTGATGAATTGGAGCTTGCTTCTCTTAGGGGAACCATACAGAGGGCAGAAATCCAGCTTAATCTCCAAAAAAGAAGAGGACATGGAGTCCTGTCTGTACTTCGTCCAAAATTCAGCGGTGTGCTTGGTGAAGCCCTAGATGTGGCAGCTAGGTGGAGTGGAGACGTTATCACTATTGAAAAAACTGTTTTGCAACAAAACTACAGTTATTATGAACTTCAAGGTGAATATGTGTTGCCTGGCACCCGAGATCGTAGTTCTGTTGACAAAGAAGGTGGCCTTATTAAAAGGTTAATGTCTGGTCATATTGGCAATGCTATATCCTCTATGGGCAGGTGGAGAATGAAACTTGAAGTTCCTAGAGCAGAGGTTGCCGAGATGCTTCCCCTTGCAAGGCTTCTTTCTCGAAGTTTGGATCCTGCTGTTCGTTCAAGATCTAAGGATTTCTTCATTCAAAATTTACAGTCGGTGGGATTATACACTGAAAGCCTTCAACAACTGCTTGAGACAGTGAGGGGGCTTCATGCTCCATCAAATGATGTCGTTCTTGAAGATTTAAGTCTGCCTGGTTTATCTGAACTCAAAGGTCACTGGCATGGATCTCTTGATGCTAGCGGTGGGGGAAATGGAGACACCCTGGCAGAATTTGATTTTCATGGAGAGGATTGGGAGTGGGGAGACTACAAAACTCAGCGTGTCTTGGCAGTGGGTGCTTACAGTAATGATGACGGCATGCACCTGGAGAAAATTCTTATCCAGAAGGATAATGCCACCATCCATGCAGATGGAACATTGCTAGGGCCTAAAACTAACCTCCATTTTGCAGTCTTGAATTTTCCGGTTAGTCTTGTTCCAACTGTAGTTCAGATCATTGAATCTACAGCAATGGATGTTGTTCATTCTCTACGACAGTTATTGGCACCCATTAAGGGTATATTGCACATGGAAGGAGATCTTAGAGGAAGTTTAGCAAAACCAGAATGTGATGTGCAAGTAAGACTACTAGATGGTTCTGTTGGTGGTGTTGATCTTGGAAGAGCTGAAGTTGTTGCCTCTCTAACCTCAACCAGTCGTTTTCTTTTCAATGCAAAATTTGAACCTATAACCCAAAATGGGCATGTACTTGTTCAAGGTAGCATTCCTGTTGCGTTTGTACAAAATAACACATTACAGGAAGATGTAGAATTAGATAAGAGTCAGATTACTTGGGTTCCTGATTGGGTGAAGGAGAAAAATAGAGGGAACGCTGATGATGCTGGTGACAAAAAGGTTAGTAGAGATAGAAATGAAGAAAGTTGGAATACTCAACTAGCAGAAAGCCTTAAAGGACTAAATTGGCAAATTTTGGATGTTGGAGAAGTCAGGATTGATGCTGATATAAAAGACGGAGGAATGACATTGGTTACAGCTTTATCTCCACATGCCAATTGGCTTCATGGAAATGCGGATTTGAAGCTTGAGGTCAGAGGTACAGTTGATCAGCCAGTACTTAATGGACACGCATCATTCCACAGGGCATCTATTTCTTCACCAGTGCTACGAAAACCACTTACCAACTTTGGTGGAAATGTTCACGTGCAATCAAACAGGTTATGCATCACCTCACTGGAGAGTAGGGTAAGCAGAAAAGGAAAGCTTCTTGTAAAAGGGAATCTGCCACTCAGAGCAAGTGAAGCAGCCCCAGATGACAAGATTGAATTGAAGTGCGAAGTTTTAGAAGTACGGGCACAAAAAATATTAAGTGGTCAGGTTGATTCTCAGTTGCAAATAACTGGTTCAATATTGCAACCGAACATATCTGGGAACATAAAAATAAGTCAGGGAGAAGCATATTTGCCACATGATAAAGGTGGTACTCCTGCTTCTAATAGATTTCCATCCAATCATTCTGGGCTTCCTACTGCTGGTGTCAGTCGTGTGTTTGCTTCAAGATATGTATCACGATTTCTCAACTCAGAATCTGCTTCAAGGACGACAGTGTCTCAATCCTCTGGCTCTGTGACGGCTAACAAGTCAACTCAGGTTGAAAAGCAGATGGAGCAAGTGCAGATTAAACCAAATGTAGAAACCTGTCTCAATGATTTGAAGCTTGTTCTTGGACCAGAGTTGAAGATAGTTTATCCTTTGATTCTTAATTTCAGTGTAAGTGGAGAGCTTGAGTTAAATGGTCGGGCCCATCCCAAATGGATAAAACCTAGAGGCATACTAACATTTGAGAATGGTGAAGTCGATCTAGTTGCAACACAGGTGAGACTAAATCGAGAGCACTTAAACATTGCAAAATTTGAGCCTGAGTATGGACTAGATCCAATGCTTGATTTAGCTTTGGTGGGATCTGAGTGGCAATTCAGAATTCAAGGTAGAGCTAGCAATTGGCAGGACAAACTTGTGGTGACCTCAACTCGTTCTATGGAACAGGATGCACTCTCACCCACTGAGGCTGCCAGAAAGTTTGAGAGTCAGTTGGCTGAATCCATTTTGGAAGGCAATGGTCAGCTTGCTTTTGAAAAGCTTGCAACAGCAACTCTGGAAAAATTAATGCCACGAATAGAAGGGAAGGGCGAGTTTGGCCAGGCTAGGTGGAGGCTAGTCTATGCACCTCAGATACCCAGTTTAGTTTCTGTTGATCCTACAGCAGATCCTCTCAAGTCACTTGCCAGTAATATATCGTTTGGTACAGAAGTTGAAGTTCAGCTTGGTAAACGTCTTCAGGCCACCATTGTTAGGCAAATGAAGGAGTCTGAGATGGCAATGCAATGGACACTGAGCTATCTTCTTACAAGTCGTTTGCGAGTGCTCCTCCAATCTGCTCCATCTAAACGCCTTCTCTTTGAATACTCTGCTACATCCCAAGATTGA 6564 0.4269 MSLKNHTLFLGTSLHGTWESGTSKRNPFLLERRKLPQKGLCNCTCCVSPRRCRLVSQALRLSAFSGQNAGFLGKDLILRGGSRLECAREPYFRSEALSSYLTPLWKEGLLLIRASACTAVVSGVCMLVWYGQNKAKGFIEANLLPSVCSVISEHIQRDLVFGKVRRLSPLSITLESCSFGPHKEEFSCGEAPTVKLRLRPFVSLRRGKLVIDAVLSHPSLLVAQKKDFTWLGIPFNEEVRERSFSAEEGIDYRTRTRRLAREEALAHWERERDDAAKEAAEVGYFVSERSCGESQGDDGLKEMETRSVESTASAPFFCMNDGKHDHRLMDKGVNYDTKHAALEKSFGVTFPASGLRFWSRVISGPRKHKFKRKANGGSIFASGVATKKRMFERSASAAHAYFCNQSQWKFGEPLSPSECYHFMSHDMHLVKSEVDRNAKPVVGDEKRSDEKRSDDSQSVTQFKDLALPHSVNENIGIQSDYLNLVCDPTLHTREGEFENLQSSDDVAEPANPNGIKEKNEEFVPYVAASHLDDNDSSSGGQRGLTSENLSFVKPNSQLETYFQNPFELLLVKFDLTSILRNMEELTSWFLSGPFAKLKSVLGLRVEDIVSEHADGIDFVQSEGVTKVLPITLDSVHFKGATLMLLAYGDKEVREMENVNGHVKFQNHYSRIHVDLSGNCNTWRSDLISEDGGWLSANVFVDTIDQNWHANLKIDNLFVPLFERILEIPIIWSKGRASGEVHLCMSKGETFPNFHGQLDVIGLDFQPLDAPSSFSNISGSLCFRGQRIFLHNASGWFGSVPLEASGDFGIHPEEGEFHLMCQVPGVEVNALMRTFKMKPLLFPLAGSVTALFNCQGPLDTPVFVGTGMVSRTFSYLQTDTTASVASEALATSKEAGALAAFDRVPFSYVSANFTFNTDNCVADLYGIRACLIDGGEIRGAGNAWICPEGEEDETAIDVNFSGSLAFDNIVLRYIPSYYHQMPLKLGVLNGETKLSGSLLRPRFDIKWTAPTAEGSFSDARGDIIISHDFITVNSASAAFDLYTRVQTSYPDDFHHKKEFNIPRAIPFTIDGVELDLRMRGFEFFSLVSAYTMDSPRPLHLKAAGRIKFQGKVLKPIGNITEQNLEMTRQNVQMLDKGIVDSLVGEVSISGLKLNQLMLAPQLSGLLRVSPKCIKLDASGRPDESLAVEFVGPLQPSSEDGLQSGKLLSISLQKGQLRANICFQPFHSANLEVRHFPLDELELASLRGTIQRAEIQLNLQKRRGHGVLSVLRPKFSGVLGEALDVAARWSGDVITIEKTVLQQNYSYYELQGEYVLPGTRDRSSVDKEGGLIKRLMSGHIGNAISSMGRWRMKLEVPRAEVAEMLPLARLLSRSLDPAVRSRSKDFFIQNLQSVGLYTESLQQLLETVRGLHAPSNDVVLEDLSLPGLSELKGHWHGSLDASGGGNGDTLAEFDFHGEDWEWGDYKTQRVLAVGAYSNDDGMHLEKILIQKDNATIHADGTLLGPKTNLHFAVLNFPVSLVPTVVQIIESTAMDVVHSLRQLLAPIKGILHMEGDLRGSLAKPECDVQVRLLDGSVGGVDLGRAEVVASLTSTSRFLFNAKFEPITQNGHVLVQGSIPVAFVQNNTLQEDVELDKSQITWVPDWVKEKNRGNADDAGDKKVSRDRNEESWNTQLAESLKGLNWQILDVGEVRIDADIKDGGMTLVTALSPHANWLHGNADLKLEVRGTVDQPVLNGHASFHRASISSPVLRKPLTNFGGNVHVQSNRLCITSLESRVSRKGKLLVKGNLPLRASEAAPDDKIELKCEVLEVRAQKILSGQVDSQLQITGSILQPNISGNIKISQGEAYLPHDKGGTPASNRFPSNHSGLPTAGVSRVFASRYVSRFLNSESASRTTVSQSSGSVTANKSTQVEKQMEQVQIKPNVETCLNDLKLVLGPELKIVYPLILNFSVSGELELNGRAHPKWIKPRGILTFENGEVDLVATQVRLNREHLNIAKFEPEYGLDPMLDLALVGSEWQFRIQGRASNWQDKLVVTSTRSMEQDALSPTEAARKFESQLAESILEGNGQLAFEKLATATLEKLMPRIEGKGEFGQARWRLVYAPQIPSLVSVDPTADPLKSLASNISFGTEVEVQLGKRLQATIVRQMKESEMAMQWTLSYLLTSRLRVLLQSAPSKRLLFEYSATSQD* 2188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1529 2187 MobiDBLite consensus disorder prediction 434 458 - -
Vra6g1529 2187 MobiDBLite consensus disorder prediction 434 460 - -
Vra6g1529 2187 MobiDBLite consensus disorder prediction 1647 1666 - -
Vra6g1529 2187 Pfam TamB, inner membrane protein subunit of TAM complex 1771 2171 IPR007452 GO:0005887|GO:0009306
Vra6g1529 2187 Coils Coil 1241 1261 - -
Vra6g1529 2187 PANTHER EMBRYO DEFECTIVE 2410 1 2187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1529 Vra-Chr6 30235001 30273779 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1529 - - gmx:100779257 3883.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1529 6 30235001 30273779 Vra5g1142 5 17894611 17922263 PCT