Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1522 ATGGAGGAGCAATTCATACTTAGAGTTCCACCGAATGTGGCAGAGAGAATAGAGCGGCTTTTGAATGAAACTGATCCTTCTTCATCTGAAGACAAGTCATTAGATTTGTCATTTAGTGAGGATGGAAGAAGTGGTACGTTTGTGATTGGGAATGAACACTTCCCAGCTTCTCTATTGGACCTTCCTTGTGTTGTTGAATCCTACAAGACATATGATGATAACTCTTTGATTAAGACTGCTGATATTGGTCAGATGATTATGGTTCGGGAATCTGGTGATGCTGCTCCAGATGTAATTGAGTACAGGCATGGTCTCACCCCGCCGATGAGAGATGCTCGCAAGCGTAGATTTCGCAGGGAGCCCGATCTTAATCCCGAGCTTGTGTCCCGTGTTGAGAAAGATCTCCTCAAAATCATGGCTCGAGGAACAGCTGAAAATATTGATGCAGAAGCCGCTGAACAAGAAGTGGAGGAGAATGCCCGAGGTGCTAACAAAAAGGTTGCACCTAAGCCTGCACCAAAACATGATGTTCCAGAGAATCTTACAAATGCAGGGGAGCCTGACAGGAGTGATTCTGAAGAATCTGATGATTCAGTCTGA 600 0.4483 MEEQFILRVPPNVAERIERLLNETDPSSSEDKSLDLSFSEDGRSGTFVIGNEHFPASLLDLPCVVESYKTYDDNSLIKTADIGQMIMVRESGDAAPDVIEYRHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIMARGTAENIDAEAAEQEVEENARGANKKVAPKPAPKHDVPENLTNAGEPDRSDSEESDDSV* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1522 199 SMART TAFII55_N_2 1 146 IPR006751 GO:0005669|GO:0006367
Vra6g1522 199 Pfam TAFII55 protein conserved region 1 140 IPR006751 GO:0005669|GO:0006367
Vra6g1522 199 Coils Coil 146 166 - -
Vra6g1522 199 PANTHER TAF7 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR 1 198 - -
Vra6g1522 199 MobiDBLite consensus disorder prediction 149 199 - -
Vra6g1522 199 MobiDBLite consensus disorder prediction 154 173 - -
Vra6g1522 199 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED 1 198 IPR037817 GO:0005669
Vra6g1522 199 CDD TAF7 2 145 IPR006751 GO:0005669|GO:0006367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1522 K03132 - gmx:100782843 328.561