Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1520 ATGGAAGAAGCACCTGAAGAACCATTACAATCGCGAGACTCTTGGCGAGATCACCAAACTTGGATAACCACACAAGACATTCTCAGGGAAAAGCTGATCACAGATGACAGTTTCTCATGGAAATTGTCCAGCGAAGGTGAGCCTGGTTATAAGAAGGGAGAAGAATTGAGATACGTTGGTGGGGTTGACATTAGCTTTTCAAAGGATGATCCATCAAAGGCATGTGGCACCCTTGTGGTGTTGGACTTCCACACTCTCCAAGTTCTCTATCAGGACTTCTCTTTTGTCACTCTCCAAGTCCCTTATGTGCCTGGTTTCCTTGCATTTAGAGAGGCCCCAGTTCTTCAACAGCTTCTAGAGAAAATGAAAAGGAGTGATAATCCTTTCTACCCTCAGCTGTTAATGGTTGATGGAAATGGAATACTTCATCCCAGAGGTTTTGGGCTGGCCTGTCATATTGGAGTTGAGGCCAATCTACCAACAATCGGGATTGGAAAGAATGCCATGAGATCAACACAGGGATCCATAAAGCCAATATTTATATCAATTGGTCATATGATATCACTTCAGACTGCCATTATGATTGTTCAAAAGACCTGCAAGTTTCGTGTGCCTGAGCCAATTAGACAGGCTGACATAAGATCTAGAGACTACATTCGGAAGCTTGAAATGAATGGCAAAGTAACATAA 690 0.4304 MEEAPEEPLQSRDSWRDHQTWITTQDILREKLITDDSFSWKLSSEGEPGYKKGEELRYVGGVDISFSKDDPSKACGTLVVLDFHTLQVLYQDFSFVTLQVPYVPGFLAFREAPVLQQLLEKMKRSDNPFYPQLLMVDGNGILHPRGFGLACHIGVEANLPTIGIGKNAMRSTQGSIKPIFISIGHMISLQTAIMIVQKTCKFRVPEPIRQADIRSRDYIRKLEMNGKVT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1520 229 Hamap Endonuclease V [nfi]. 4 222 IPR007581 GO:0004519|GO:0006281
Vra6g1520 229 PANTHER ENDONUCLEASE V 168 225 IPR007581 GO:0004519|GO:0006281
Vra6g1520 229 PANTHER ENDONUCLEASE V 11 167 IPR007581 GO:0004519|GO:0006281
Vra6g1520 229 CDD Endonuclease_V 19 217 IPR007581 GO:0004519|GO:0006281
Vra6g1520 229 Gene3D archaeoglobus fulgidus dsm 4304 superfamily 169 227 - -
Vra6g1520 229 Gene3D archaeoglobus fulgidus dsm 4304 superfamily 17 168 - -
Vra6g1520 229 PANTHER ENDONUCLEASE V 168 225 - -
Vra6g1520 229 PANTHER ENDONUCLEASE V 11 167 - -
Vra6g1520 229 Pfam Endonuclease V 53 169 IPR007581 GO:0004519|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1520 K21813 - gmx:100527675 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1520 6 30092129 30095536 Vra6g1520 6 30092129 30095536 ECH