Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1511 ATGGCGATGCTTTGGAAGGTATCATCGTCACTCTTCCTTTCACTCTCCCTCAAACCTAAACTCATCTACCGCACCAATGCCTTTCTGCTTTCTCGTTCAACCGCCACCACCTCAAAGCACAAGACGCAGAACGCAAAAGCAGGCTTGGCCAAAGAAAAGCGCAGAACACGCTCCGACAAACACTTCAACCCAGACGCTATAATTCACCATTGCAACCTTAACCACTCCGACACCGACACCAACTTCTCGCACATTCCGGTCATGCTGGGTGAAGTCATGGACGTCTTCTCCGCTGCTTCCTTAACCTCCTTCGTCGACTGCACCCTTGGCGCTGCCGGTCACTCCACCGCCGTGATCAAGGGTCATCCTGAGATGAAATTTTTCGTGGGGATGGATGTGGATTCTGTTGCACACGACATTGCCCAGCCTCGCCTTGATGCCGTTTTAAGTGGGGATGTCAAAGCTTTTACCGTTTTGAGGAATTTTAGAGACGTGAAGTCTGTGCTTAGAGAATTCTCAGACTCACACATGGGTGTTGATGGCATCTTAATGGACTTGGGAATGTCATCTATGCAGGTAGACAATCCTGCAAGAGGATTCAGTGTGCTCAGTGATGGACCCCTTGATATGCGGATGGATCCTCAGGCAAGTCTTAAAGCAGAGGACATATTAAATTCCTGGCCAGATTCTGAAGTGGGCCGTATCCTAAGAGAATATGGAGAAGAAAGTAATTGGCGAACCCTGCAAAAGAAAATTGTCAATACCCGGCTACATGGTGGATTTCACTCTACCTCTGATTTGCTAGATCTTATCAAGCGTGTGACTCCTCCAATGAAAGGTGGAAGACAAGGTTGGATAAAGACAGCAACCCGGGTTTTTCAAGCTCTGAGAATTGCTGTTAATGATGAACTGAAGACACTTGAGGATTCCCTCTATTCTTGTTTTGATTGCCTTGCACCCAAGGGTAGACTTGCTGTCATATCTTTTCACAGTCTTGAAGACAGAATTGTGAAACAGACATTTCTTAATATAGTCAAAGGGAGCGAAGAAGAGGAAGAAAGGGAGAACCTGAACAGTGATTTGAGGAAGACTAGTGATGAAATCAAAGAAAAAGAAGCATGGATAAAGCAAGTAATACATGGATCAAATGGAACAATTCTCACAAAAAGACCAATCACACCATCAGGAGAAGAAGAAAAATTGAACCGCAGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGCACTGA 1251 0.4548 MAMLWKVSSSLFLSLSLKPKLIYRTNAFLLSRSTATTSKHKTQNAKAGLAKEKRRTRSDKHFNPDAIIHHCNLNHSDTDTNFSHIPVMLGEVMDVFSAASLTSFVDCTLGAAGHSTAVIKGHPEMKFFVGMDVDSVAHDIAQPRLDAVLSGDVKAFTVLRNFRDVKSVLREFSDSHMGVDGILMDLGMSSMQVDNPARGFSVLSDGPLDMRMDPQASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKIVNTRLHGGFHSTSDLLDLIKRVTPPMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPKGRLAVISFHSLEDRIVKQTFLNIVKGSEEEEERENLNSDLRKTSDEIKEKEAWIKQVIHGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1511 416 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 81 415 IPR002903 GO:0008168
Vra6g1511 416 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 84 416 IPR002903 GO:0008168
Vra6g1511 416 Pfam MraW methylase family 81 415 IPR002903 GO:0008168
Vra6g1511 416 Coils Coil 347 367 - -
Vra6g1511 416 Gene3D Putative methyltransferase TM0872, insert domain 196 303 IPR023397 GO:0008168
Vra6g1511 416 Gene3D Vaccinia Virus protein VP39 84 413 IPR029063 -
Vra6g1511 416 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 56 415 IPR002903 GO:0008168
Vra6g1511 416 SUPERFAMILY Putative methyltransferase TM0872, insert domain 198 301 IPR023397 GO:0008168
Vra6g1511 416 MobiDBLite consensus disorder prediction 386 416 - -
Vra6g1511 416 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 415 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1511 K03438 - gmx:100787277 689.108