Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1507 ATGGCTCTGCACCTCTGTGTCACTTTCAATTCAACCACTTCCAGTTTTACTCAAGGTAGAAAATGCAAGTACGAAGGCCAATCAGTGAGAGCACTTCCTATACGTATATTATCAGTGGGGAAGAAGCGATCACCTGGACTTCAACTCATGGTTGATGAGTATGTTGATAAGCTCAGGTACTATTGCAATGTCGAGGACCTTCAAATTCGGACAAATCCTCGAAACTCGCGTGACCAAAGGGCTCAGGTTGATGCTGAAGATGAGGCAGTGATGAACCTTATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAACGTGGGCTAGACATAGGATCTGAGCAAATGGCAGAGTTGGTGGGTGATGCAGGAAATACTGGTGCTTCTCGGATATCTTTTTGTATTGGTGGTCCCTATGGTCATGGAAGAAAAATAAAGGAACGGGCTAACTTATCAATCAAGTTATCTTCACTTGTCTTAAATCACCAAATAGCATTAGTTGTACTCATGGAACAGCTTTACAGGTCTTGGACAATTTTAAAAGGACAAAAGTACCACCATTAG 561 0.4242 MALHLCVTFNSTTSSFTQGRKCKYEGQSVRALPIRILSVGKKRSPGLQLMVDEYVDKLRYYCNVEDLQIRTNPRNSRDQRAQVDAEDEAVMNLIRSDDWVVMLDERGLDIGSEQMAELVGDAGNTGASRISFCIGGPYGHGRKIKERANLSIKLSSLVLNHQIALVVLMEQLYRSWTILKGQKYHH* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1507 186 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 32 186 IPR003742 GO:0006364|GO:0008168
Vra6g1507 186 Gene3D - 33 186 IPR029026 -
Vra6g1507 186 SFLD SPOUT Methyltransferase 6 186 - -
Vra6g1507 186 PIRSF MT_bac 32 186 IPR003742 GO:0006364|GO:0008168
Vra6g1507 186 SUPERFAMILY alpha/beta knot 33 184 IPR029028 -
Vra6g1507 186 Pfam Predicted SPOUT methyltransferase 34 185 IPR003742 GO:0006364|GO:0008168
Vra6g1507 186 CDD RlmH-like 34 186 IPR003742 GO:0006364|GO:0008168
Vra6g1507 186 PANTHER METHYLTRANSFERASE 11 186 IPR003742 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1507 K00783 - gmx:100796609 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1507 6 29924526 29928440 Vra6g1507 6 29924526 29928440 ECH