Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1504 ATGAAGAAGGAACGTGCATGGCCGCAATTCATAAGGAATCTTTTGATCATGGTTGGATCAAGAAGCCGGCCACAGTTGAGGAGGCCTACTTGGATCATTGTTCTTGTTTCCATAGTGTGTGTGTTTCTCGTTGCTGCCTACGTGTATCCGCCGCGGAGCCCGTCTTCCTGCTCCCTCTTCTCTTCCAGTGGTTGTGGTGGCAGCATTAACGATCTACCGCCTGCGGCTCAGTCGCGCCAATTGACTGATGCGGAGGTTGAGTCTCGGGTTGTTATTAACGAGATTCTCAACTATTATCCTGTGATAACCAAGAAACCTAAAGTAGCTTTTTTGTTTTTGACTCCGAGTTCGTTGCCGTTCGAGAGGCTCTGGCACATGTTCTTTAAGGGCCATGAGGGAAAATTCTCTGTTTATGTACATGCATCAAAGGACAAGCCAACACATGTCAGCCCCTATTTTGTTGGTCGAGACATTCACAGTGCACCGGTAGGCTGGGGAAAAATTTCTATGGTTGAGGCTGAAAGAAGACTTTTGGCAAATGCACTGTTAGACCCTGATAATCAGCATTTTGTATTGTTGTCTGAAAGCTATGTGGATCCTGGTCCTCATGGAAATGGCAGGTATATAGAATATATGTTGCCCGAAGTGGAAAAGAAAGATTTCCGAAAGGGTTCCCAGTGGTTCTCAATGAAACGGCAGCATGCTATAATAGTTATGGCAGACAGTCTCTATTTTACAAAATTCAAGCACCATTGCAGGCCAAATATGGAGGGAAACCGCAATTGCTACGCTGATGAGCATTACCTGCCAACCTTCTTTACTATGCTTGATCCAGGTGGAATCGCAAATTGGTCAGTAACATATGTTGATTGGTCTGAAGGAAAATGGCATCCAAGGTCATTCAGAGCTCGGGATGTTACTTATCAAGTCATGAAAAACATAGCATACATTGATGAAAGTCCACATTTTACTAGTGATGCAAAGAGGACAGTGGTGATTACACCGTGCGTATTGAACGGCTCAAAACGATCATGTTATCTATTTGCCCGGAAGTTTTTCCCAGAAACTCAGGAAAGATTGATCCAACTCTACTCTAATTCTACAATATTCTAA 1113 0.4394 MKKERAWPQFIRNLLIMVGSRSRPQLRRPTWIIVLVSIVCVFLVAAYVYPPRSPSSCSLFSSSGCGGSINDLPPAAQSRQLTDAEVESRVVINEILNYYPVITKKPKVAFLFLTPSSLPFERLWHMFFKGHEGKFSVYVHASKDKPTHVSPYFVGRDIHSAPVGWGKISMVEAERRLLANALLDPDNQHFVLLSESYVDPGPHGNGRYIEYMLPEVEKKDFRKGSQWFSMKRQHAIIVMADSLYFTKFKHHCRPNMEGNRNCYADEHYLPTFFTMLDPGGIANWSVTYVDWSEGKWHPRSFRARDVTYQVMKNIAYIDESPHFTSDAKRTVVITPCVLNGSKRSCYLFARKFFPETQERLIQLYSNSTIF* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1504 370 Pfam Core-2/I-Branching enzyme 195 314 IPR003406 GO:0016020|GO:0016757
Vra6g1504 370 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 198 - -
Vra6g1504 370 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 196 368 - -
Vra6g1504 370 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 198 IPR044174 GO:0016757
Vra6g1504 370 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 196 368 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1504 Vra-Chr6 29878164 29886895 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1504 - - gmx:100788165 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1504 6 29878164 29886895 Vra6g1504 6 29878164 29886895 ECH