Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1502 ATGAGTTTCAAAAGCTCTTCTCTTCTCTGCATAGCGCTTCTGCTTGCATTGTCTTCAACTATTAATGGCTTTAACATCACAGAGATGTTGGAAAAGTATCCAGAGCTATCCTCATTCAACAAGTACATCACCGAATCCAAGCTTGCAGACCAAATCAACAGCCGCAACACCATAACCGTTCTTGCTGTTGAGAACGGCGCCATCTCTTCCATTTCCGGAAAAACCCCAGAAGTCATTAAGGCCATCATCGCCACCCACATCATCCTTGATTACTATGATGAGAAGAAGCTCATGGAAGTTCAAGCTAGCAGCCCCCAGTTGACAACCCTCTACCAGTCCACAGGCCTTGCCGTCAACCAACAAGGCTTTGTCAACGTTTCACTCATCGGCGAGGGCGAAATCGCCTTCACCCCCGCCGGCACTAAAGACTACTCAGAGCTCGTCAAGACCGTCACCACACAGCCCTACAACATCTCCATTCTTCAAATCACCAAGCCCCTCATCGCCCCAGGTATTGACAATCAAACCAAATCTGCACAGTCACCACAACAAGCTAAAGCCTCTCCCCCCACAGAGACAGCCAAGGCACCAGCTCCCTCGACAAAGAGTGGCAAGGCACCTGCTCCTTCCACAGAGAGTGCCAAAGCACCCGCAACGAAAGACGGTGCCAAGGCACCAGCTCCAGCGGAGGATGCAAAATCTCCTACTGCACCCGAGTCTGCTGAGGCACCAGCTCCTTCGGAAACTGCGGCCGCGCCTTCACCTGCCGAGTCTCCTAAAGCAGATGCCCCAACAGAAGCTGATGCCCCTGCAGATGGTCCCGCTGCTGATGCTGCTGCAGATACTGCAAGCTCCTCCACCATTATTAAGATGAGCTTGGTTGGATCATGCATGGCCTTCGCTTCACTCTTGATTGTTTTATAA 924 0.5152 MSFKSSSLLCIALLLALSSTINGFNITEMLEKYPELSSFNKYITESKLADQINSRNTITVLAVENGAISSISGKTPEVIKAIIATHIILDYYDEKKLMEVQASSPQLTTLYQSTGLAVNQQGFVNVSLIGEGEIAFTPAGTKDYSELVKTVTTQPYNISILQITKPLIAPGIDNQTKSAQSPQQAKASPPTETAKAPAPSTKSGKAPAPSTESAKAPATKDGAKAPAPAEDAKSPTAPESAEAPAPSETAAAPSPAESPKADAPTEADAPADGPAADAAADTASSSTIIKMSLVGSCMAFASLLIVL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1502 307 ProSiteProfiles FAS1/BIgH3 domain profile. 23 148 IPR000782 -
Vra6g1502 307 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 303 - -
Vra6g1502 307 SUPERFAMILY FAS1 domain 30 170 IPR036378 -
Vra6g1502 307 MobiDBLite consensus disorder prediction 172 283 - -
Vra6g1502 307 MobiDBLite consensus disorder prediction 172 208 - -
Vra6g1502 307 Gene3D FAS1 domain 23 167 IPR036378 -
Vra6g1502 307 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 303 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1502 Vra-Chr6 29847306 29848644 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1502 - - vun:114195537 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1502 6 29847306 29848644 Vra6g1502 6 29847306 29848644 ECH