Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1499 ATGGATTCCATCTACGCGAGCTCCTCGTGCACGGTTCCCCACCTTCTCCGTCGCGACACTCTGCTCTTGCTGCCGCGAACCTCGAATTTCACTGCTCCATATTCGTTTCAGCGGACGAAAAGGGCGCGCCGTATGCGGATTTCGAGTTCCGCCGCGACGAACGGCGCCGTTTCGAGGGCGCTTCAGGCAGTGAGCAGCACTGCGCTGGAGCAGCTCGATATCGAGCGTGGCGTCTGCATCCCTTTCCGCAAGTACTCGCCCGAGATCGTGAGAAATAAGGTGTTGGAATCAAGAGGATCCACCTTGTCACTTATGTTGCGGGGAGTGGAGATAGTTTGGAATCTGGGCTTGTACTGGTCTAACTTGGTGTATGATTTCTTGGTTGGAAGGGATGAAGAGGTTGTTCCATATCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGGCCTTCCTTCATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCTGATATCATTCGAGAAGATTATATGAATGAACTCTGCATCCTTCAAGATGATGTTCCTTCATTTCCTAATCAAATTGCCTTCAGAATCATAGAGGAGGATCTGGGTCAACCCCTTGAAGCTGTTTTCAGCAAAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGAGCAACATTGCGTGCCACTGGCGAAGATGTTGCTATCAAGGTTCAGAGGCCTGGGATAGAGCCTATTATATATCGGGATCTTTTCTTATTCCGCACTCTGGCTTCATTCTTAAATGGCATCAGTATGCAGAAGCTGGGATGTAATGCTGAGCTGATTGTTGATGAATTCGGTGAAAAGCTTTTGGAAGAGCTTGATTATACCCTGGAGGCCCGAAATCTTGAAGACTTCCTGGAGAATTTTAAAAATGACCCTACTGTCAAAATTCCCAGGGTTTACAAACAATTTTCTGGTCCTCGTGTGCTGGTAATGGAATGGATTGATGGTATCAGGTGTACCAATCCACAGGCTATCAAAGAAGCTGGTATTGATGTAGATGGATTTTTAACAATTGGAGTGAGTGCTGCCCTACGGCAATTGTTGGAATTTGGACTATTTCATGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGGCGAATTGCATATGTGGACTTTGGCAATGTCGCTGTTCTCAGTCAGCAAAATAAACAGATTTTAATTGATGCTGTTGTCCACGCTGTGAATGAGGACTATGCTGAAATGGCTAATGATTTCACCAGATTAGGCTTCCTGTCACCAGGGACTGATGTTACTCCTATAATTCCTGCTTTGGAAGCAATTTGGCAGAACTCTGCAGGAAAAGGACTGTCAGATTTTAATTTTCGTAGTGTCACTGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATTCCAGAAAGGTTTTCACTTGTAATTCGATCCTTACTGACCCAAGAAGGCATCTGTTTTACTCTGAAACCTGACTTCAAATTTCTTGAGGTTGCCTACCCTTATGTGGCTAAGCGACTATTGACTGACCCAAATCCAGCTCTACGTGAACGCCTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTGGCGAAAATGAGTAACAATCCGGCATTGAAAGTGAAAGACACGCAAATCCAGAGGGACTGGAAATTTGAAAGAAAATTGGACCTCACTGACACAATCAAAGATGGAGCTCGCCTCTTCTTTGTTGATGAAGGAATACGAAGGCAGCTTCTTCTTGCTTTGACTGAGGATTCAAAGCTTCATATTGAAGAGCTTGTCGATGTGTATAGGTTGGTTGAAGATCAGATAGACATCCCTTCTGTGGCCGTAGAAGTAGCTAGAGACTTACCAACAGTTGTGAGGGATCTCCTACTTTCATGGAGTGAGTCAATCTTGTCTGATAGATAG 1989 0.45 MDSIYASSSCTVPHLLRRDTLLLLPRTSNFTAPYSFQRTKRARRMRISSSAATNGAVSRALQAVSSTALEQLDIERGVCIPFRKYSPEIVRNKVLESRGSTLSLMLRGVEIVWNLGLYWSNLVYDFLVGRDEEVVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPSFPNQIAFRIIEEDLGQPLEAVFSKISSETIAAASLGQVYRATLRATGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISMQKLGCNAELIVDEFGEKLLEELDYTLEARNLEDFLENFKNDPTVKIPRVYKQFSGPRVLVMEWIDGIRCTNPQAIKEAGIDVDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLSPGTDVTPIIPALEAIWQNSAGKGLSDFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSNNPALKVKDTQIQRDWKFERKLDLTDTIKDGARLFFVDEGIRRQLLLALTEDSKLHIEELVDVYRLVEDQIDIPSVAVEVARDLPTVVRDLLLSWSESILSDR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1499 662 ProSiteProfiles Protein kinase domain profile. 208 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1499 662 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 39 662 - -
Vra6g1499 662 Gene3D Transferase(Phosphotransferase) domain 1 206 407 - -
Vra6g1499 662 SUPERFAMILY Protein kinase-like (PK-like) 179 417 IPR011009 -
Vra6g1499 662 CDD ABC1_ADCK3-like 178 424 - -
Vra6g1499 662 Pfam ABC1 atypical kinase-like domain 178 422 IPR004147 -
Vra6g1499 662 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 1, CHLOROPLASTIC 39 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1499 Vra-Chr6 29793261 29803352 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1499 - - gmx:100819754 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1499 6 29793261 29803352 Vra6g1499 6 29793261 29803352 ECH