Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1494 ATGGCCACTGAACCAAAAGCAGCCACCGAGGACGTCAAGATCGACCTCTTCGAAGACGATGATGAGTTTGAAGAGTTTGAAATCAACGAAGAGTGGTTTGACAAGGAGGAAGGAAAGGAAGTGACTCAACAGTGGGAGGATGATTGGGATGACGATGATGTCAGTGATGATTTCTCTCTCCAATTGAGAAGGGAATTGGAGAGCAACACTGAGAAGAACTAA 222 0.455 MATEPKAATEDVKIDLFEDDDEFEEFEINEEWFDKEEGKEVTQQWEDDWDDDDVSDDFSLQLRRELESNTEKN* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1494 73 Pfam DSS1/SEM1 family 10 67 IPR007834 GO:0006406|GO:0008541|GO:0043248
Vra6g1494 73 PANTHER 26 PROTEASOME COMPLEX SUBUNIT DSS1 1 72 IPR007834 GO:0006406|GO:0008541|GO:0043248
Vra6g1494 73 SMART DSS1_SEM1_2 9 68 IPR007834 GO:0006406|GO:0008541|GO:0043248
Vra6g1494 73 MobiDBLite consensus disorder prediction 29 54 - -
Vra6g1494 73 PANTHER OS01G0316800 PROTEIN 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1494 Vra-Chr6 29650175 29653277 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1494 K10881 - gmx:100306674 99.3673