Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1468 ATGGCACTGACCCTTCTTATGGTTGTTGCTGTTCTTGGGAATGTTGCCTCAATGTCTCTTTACGCTGCACCAACGGTTACCTTCAAAAGGGTCATAAGGAAGAAAAGTACAGAAGAGTTTTCATGCATTCCTTACATCATAGCCCTGATGAACAGTCTCCTTTACACTTGGTATGGATTGCCAGTCATAAGCAACAAGTGGGAAAATTTTCCTCTTGTCACAGTTAATGGAGTTGGGGTTCTCTTTGAACTATCTTACGTTCTCATCTATTTCTGGTATTCTTCACCCAAAGGAAAGGTGAAGGTGGCCATTACAGCATCAGCAGTTCTTACAGTGGTAGGTGTAATTGCCATTGTATCAACTTTTGCCATCCCCGATCACCGCCACCGAAAGCTTCTGGTGGGTAGCATAAGCCTGGCGGTCTCAATAGCACTGTATGCATCGCCTCTGGTTGCAATGAAGAAAGTGATAGAAACCAAGAGCGTGGAATTCATGCCTCTGCCTTTGTCTTTGAGCTCCTTGTTGGCCAGTTTACTGTGGATGACTTACGGACTCCTCATTCGTGATATTTTCGTTGCGGGGCCAAATGTGGTTGGAACTCCCCTTGGTATCCTCCAGCTGGTTCTGCACTGCAAATACGGGAAGAGGAGGCAGAAGGAAGAACCGAACAAGCAAAACGTGCAGGAGGAAAAGGTGGACATGGAAATGGGACATCATAAGGACGGGAATGTTCCTAGTAACTGA 744 0.4597 MALTLLMVVAVLGNVASMSLYAAPTVTFKRVIRKKSTEEFSCIPYIIALMNSLLYTWYGLPVISNKWENFPLVTVNGVGVLFELSYVLIYFWYSSPKGKVKVAITASAVLTVVGVIAIVSTFAIPDHRHRKLLVGSISLAVSIALYASPLVAMKKVIETKSVEFMPLPLSLSSLLASLLWMTYGLLIRDIFVAGPNVVGTPLGILQLVLHCKYGKRRQKEEPNKQNVQEEKVDMEMGHHKDGNVPSN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1468 247 MobiDBLite consensus disorder prediction 218 247 - -
Vra6g1468 247 Gene3D - 10 105 - -
Vra6g1468 247 Gene3D - 130 229 - -
Vra6g1468 247 PANTHER RAG1-ACTIVATING PROTEIN 1 4 235 - -
Vra6g1468 247 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 235 - -
Vra6g1468 247 MobiDBLite consensus disorder prediction 218 240 - -
Vra6g1468 247 Pfam Sugar efflux transporter for intercellular exchange 8 97 IPR004316 GO:0016021
Vra6g1468 247 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1468 Vra-Chr6 28957415 28960436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1468 1 231 Miscellaneous Gene Families AT5G53190 54.237 4.32e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1468 K15382 - gmx:100785477 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1468 6 28957415 28960436 Vra6g1468 6 28957415 28960436 ECH