Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1463 ATGTTCACATCCAACCACTTGAACAGCAACACCATCAACACCAACAGCGACACCACCTTTCTCTCCGTTGGTGGCGGTGCCAAGTGCAAGTTCTGGTTAATGGCGGCTGTGGCCTCGCCCTCTACTCCGGCGGTTCTTTTCACCGCTCTCGCCGGCGTCGCCATCGTCGCCGTGATTTTCTACGGCGCCAGTAGGGGCCGGCTTAAATCACCATGGTCACAAAGGAGAAGAAAACACGCTCTGTCAGCTCATCAATGGAAATCCTTGTTTACAGAAGATGGTAAATTCTGTGATGGTGGAAATAAGTTCCTGAGAAGAGTGCGCAGTGGAGGTGTTGATCCTAGTATTAGGGCTGAGGTTTGGCCATTCTTGCTTGGAGTGTATGACTTAGGCAGCACCAAGGGTGAAAGAGATGTTATAAGAACTCAAAATAGAAAGCAGTATGAGAAACTACGCAGACAATGTCGGAGACTCATCAAGCAAAGTAATGAGCAAAATAAGTTAAATGAAGTCGGTGAAATCAGCTTTGAGGGAGATGCTAAACTTCTGTCTCAAGATTCTGGTTCTGCCAGTTCTGATGATGCAGCCAGTGCTAGGGAATCTCTTTCTAGTGAGGATAGAAGCTCTGATGTTGACCGTTCCGACAATCTGTCCAGTGCCCTGTTGGAAGGAGAAGATGTGAATAACGCTGATGCCTCTACATTGGATACTGATTTCTCTGATTCGGACTCCTCTGAAGGTCCTGAAGTAATTCAGGCAGTTCCTTCTGATGATGTTAAGGAACATAACAATCCAGACAAAGCTTCCCAGGAAGTATCTTCTACCACAAAAGCAAAAATCCCATCAAAGGCACCAACCAATGAAGATTTTTCCACCTGGCAACGAATCATCCGACTTGATGCAGTACGCGCTAATGCTGAATGGATGTCATGTTACCCATCTCAAGCCTCGGTATCAGAAAGTAGGGCACGTCGAAGTGCTGAGGCTGTTGGCTTGAAGGACTATGGTCACCTAGAGCCTGGCAGAATCTTCCATGCTGCTCGACTAGTTGCTATTCTTGAAGCATATGCTCTCTATGATTCTGACATTGGCTACTGCCAAGGTATGAGTGACCTGCTATCTCCTATAGTTAGTGTTATATCAGAGGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCACGGCAAAATTTTAGGCTTGATGAAGTGGGTATTCGCAGGCAACTGGATTTAGTTGCAAAAATAATCAAGTTTAAGGATGCCCACCTTTTTAGGCATTTGGAAAAGCTTCAAGCTGAGGATTGTTTTTTTGTCTATAGAATGGTGGTGGTAATGTTTCGAAGGGAATTGACATTTGAACAGACCCTTTGCCTATGGGAAGTGATGTGGGCAGATCAAGCGGCAATAAGAGCAGGTATTGGGAAATCTTCGTGGAGCAGAATTAGGCAGCGTGCTCCACCAACAGAAGATTTATTACTTTATGCAATAGCAGCTTCGGTATTGCAGAGAAGGAAATTGATCATTGAGAAGTACAGCAGCATGGATGAGATCATTAAGGAATGCAATAGTATGTCTGGTCATCTTGATGTTTGGAAACTGCTTGATGATGCACATAACTTAGTGGTCATTCTGCATGACAAAATAGAGACATCATTCTCATGA 1671 0.4476 MFTSNHLNSNTINTNSDTTFLSVGGGAKCKFWLMAAVASPSTPAVLFTALAGVAIVAVIFYGASRGRLKSPWSQRRRKHALSAHQWKSLFTEDGKFCDGGNKFLRRVRSGGVDPSIRAEVWPFLLGVYDLGSTKGERDVIRTQNRKQYEKLRRQCRRLIKQSNEQNKLNEVGEISFEGDAKLLSQDSGSASSDDAASARESLSSEDRSSDVDRSDNLSSALLEGEDVNNADASTLDTDFSDSDSSEGPEVIQAVPSDDVKEHNNPDKASQEVSSTTKAKIPSKAPTNEDFSTWQRIIRLDAVRANAEWMSCYPSQASVSESRARRSAEAVGLKDYGHLEPGRIFHAARLVAILEAYALYDSDIGYCQGMSDLLSPIVSVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDLVAKIIKFKDAHLFRHLEKLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAAIRAGIGKSSWSRIRQRAPPTEDLLLYAIAASVLQRRKLIIEKYSSMDEIIKECNSMSGHLDVWKLLDDAHNLVVILHDKIETSFS* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1463 556 Coils Coil 141 168 - -
Vra6g1463 556 MobiDBLite consensus disorder prediction 268 286 - -
Vra6g1463 556 PANTHER SMALL G PROTEIN SIGNALING MODULATOR 2-LIKE ISOFORM X1 20 551 - -
Vra6g1463 556 MobiDBLite consensus disorder prediction 230 249 - -
Vra6g1463 556 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 268 401 - -
Vra6g1463 556 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 90 429 IPR035969 -
Vra6g1463 556 MobiDBLite consensus disorder prediction 199 213 - -
Vra6g1463 556 Gene3D - 405 552 - -
Vra6g1463 556 SMART tbc_4 108 514 IPR000195 -
Vra6g1463 556 MobiDBLite consensus disorder prediction 184 198 - -
Vra6g1463 556 Pfam Rab-GTPase-TBC domain 348 468 IPR000195 -
Vra6g1463 556 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 406 543 IPR035969 -
Vra6g1463 556 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 20 551 - -
Vra6g1463 556 ProSiteProfiles TBC/rab GAP domain profile. 111 469 IPR000195 -
Vra6g1463 556 MobiDBLite consensus disorder prediction 184 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1463 Vra-Chr6 28886823 28890898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1463 - - gmx:100789579 898.271