Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1462 ATGGCGATAATCTCCGATTACCAAGAAGAGGAGCAGATCAACGCTAGTTACTCTGAACCCTCTGCCTCGTCTAAATCGGAAACTCATTTGTTCAGTGCCAATTTTGACACCTCCAACCCTCAAGATTTTCTGCGCAAAGTATTCGATTTCGTTGCCCAAACAAGCGACTTCTTCCAAAAGGATACCGCCGTGGAAGAGGTTGTTTCTGTGGCGCGAGCAGCTAAAGTGAAGGCAGTAGTGGAAACGGCTGAGAAGAAAAAGAAGGAAGTGGAATCTGCGAAGGAGGCGGCGGCGGCGGCGAAGAAAAAGAAGGAAGTAGAAGCATCCAAAGAGGAGACGGCGGCAGCGGAGAAAAAGAAGAACCAAGAGAGCGCTTCAATAGTACCAAACAAAGGTAATGGTCTGGATCTAGAAAATTACTCCTGGACTCAAACTCTGCAGGAGGTCAATGTGAGTGTTCGTGTGCCTAATGGAACGAAATCTAGGTTTGTCATCTGCGATATAAAGAAGAATCATCTAAAAGTTGGACTTAAAGGCCAACCACCAATAATTGATGGCGAACTATATGAAGCCATAAAGCCAGATGACTGTTATTGGAGCATAGAGGATCAGAATACAATTTCTATTCTTTTGACCAAGCATAATCAAATGGAGTGGTGGAAATGTGTTGTAAAGGGTGATCCTGAAATTGATACCCAAAAAGTGGAGCCCGAGAACAGCAAACTTGCTGACCTCGATCCTGAAACTCGACAGACTGTAGAAAAAATGATGTTTGATCAGAGACAGAAGTCTATGGGCCTCCCTACTAGTGATGAGCTCCAGAAGCAGGAAATCTTGAAGAAATTTATGAGCGAGCATCCAGAGATGGACTTCTCAAGGGCAAAAATATCATAA 894 0.4418 MAIISDYQEEEQINASYSEPSASSKSETHLFSANFDTSNPQDFLRKVFDFVAQTSDFFQKDTAVEEVVSVARAAKVKAVVETAEKKKKEVESAKEAAAAAKKKKEVEASKEETAAAEKKKNQESASIVPNKGNGLDLENYSWTQTLQEVNVSVRVPNGTKSRFVICDIKKNHLKVGLKGQPPIIDGELYEAIKPDDCYWSIEDQNTISILLTKHNQMEWWKCVVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSDELQKQEILKKFMSEHPEMDFSRAKIS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1462 297 Pfam CS domain 139 213 IPR007052 -
Vra6g1462 297 Coils Coil 73 119 - -
Vra6g1462 297 CDD p23_NUDC_like 140 224 - -
Vra6g1462 297 MobiDBLite consensus disorder prediction 99 119 - -
Vra6g1462 297 MobiDBLite consensus disorder prediction 9 28 - -
Vra6g1462 297 ProSiteProfiles CS domain profile. 135 224 IPR007052 -
Vra6g1462 297 PANTHER NUCLEAR MIGRATION PROTEIN NUDC 22 297 - -
Vra6g1462 297 MobiDBLite consensus disorder prediction 1 28 - -
Vra6g1462 297 Gene3D - 131 258 IPR008978 -
Vra6g1462 297 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 22 297 IPR037898 -
Vra6g1462 297 SUPERFAMILY HSP20-like chaperones 127 239 IPR008978 -
Vra6g1462 297 MobiDBLite consensus disorder prediction 99 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1462 Vra-Chr6 28877387 28882672 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1462 K25866 - gmx:100775670 362.073