Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1446 ATGGCCAAATCAAAACATAGGCTTTCACTCCTCTCACTGCACTCACAAATATACCTACCACACTCGTCAACCATCATGCTCATACAAACTACTCTCCCCTTTGCATGTCCAAGAACTGTTCGCCACCGCATGGTGCCACCGAAATGTGTCCTCTCAATGTCCCCGCCACCAAAAGTGCGGAGGACCCACCCATTGCCGACGGAAAAGTTAGAGGTTTTCAGGTCACTGGAAGGGTGGGCTTCGCAGTATGTCCTACCGCTGCTGAAACCCGTGGAAAAAAGCTGGCAGCCGAACAGTTTCGTTCCCAACCCATCGTCGCCGTTTGAAAAGTTCGTGGACGAGGTGAAGGCTCTTCGCGATCGAACCAAGGAGCTATCTGACGAGTACTTCTTGGTGCTGGTCAGTGACATGATCACAGAGGAAGCTCTTCCCACTTACCAGACCACAATGAACAGCCTCGACGGCGTGAAAGACGAGTGCGGAACAAGCCCAAGCCCAAGCCCAAACCCGTGGGCTGTGTGGACTCGGGCCTGGTCCACGGAAGAGATGGAGATTTGCTCATAA 564 0.5301 MAKSKHRLSLLSLHSQIYLPHSSTIMLIQTTLPFACPRTVRHRMVPPKCVLSMSPPPKVRRTHPLPTEKLEVFRSLEGWASQYVLPLLKPVEKSWQPNSFVPNPSSPFEKFVDEVKALRDRTKELSDEYFLVLVSDMITEEALPTYQTTMNSLDGVKDECGTSPSPSPNPWAVWTRAWSTEEMEICS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1446 187 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 54 182 IPR005067 GO:0006631|GO:0045300
Vra6g1446 187 SUPERFAMILY Ferritin-like 58 183 IPR009078 -
Vra6g1446 187 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 54 182 - -
Vra6g1446 187 Coils Coil 108 128 - -
Vra6g1446 187 Pfam Fatty acid desaturase 68 182 IPR005067 GO:0006631|GO:0045300
Vra6g1446 187 Gene3D Ribonucleotide Reductase, subunit A 55 184 IPR012348 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1446 Vra-Chr6 28446871 28447497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1446 41 182 Acyl Lipid Metabolism Gene Families AT3G02630 57.746 8.00e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1446 K03921 - gmx:100816146 201.445