Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1442 ATGAGCGCGTCCAACAAATGGAGAGCAATGCCACCGCACAACCACCAGCCTCTCTGCACGCGCACGCACCAGATCGGAGCCCTCCTCCTCGTCACCACCACCTTCTTCTTCACGCGCCTCCTCTCTCCCTGCACCCTCTCCACCAGCGTCGTCCACTTGTCACACCCGCAATTACAGTGGGGGCAGTCGCAGCTCTCTCTCAAGATCTACGTCTACGAACCTGAAGAAATCAACGGCTTGAATAACCTCTTGCACGGACGAGACGGTAAGGTCACGGAAGAAGCTTGCCTTAAAGGCCAGTGGGGCACTCAGGTGAAAATACACAAGTTTCTCCTGCAATCGAAGCAACGGACGAGGAAGAAGGAGGAAGCGGATCTGTTCTTTGTCCCATCGTATGTTAAATGTGCTCGCATGATGGGTGGCCTTAACGACAAAGAAATTAACCACACCTATGTCCAAGTCATAAGTCAAATGCCGCATTTTCGATTATCAGGGGGCCGCAACCATATTTTTGTTTTCCCCAGTGGAGCTGGTGCTCACTTGTTCAAATCATGGGCAACGTATATAAATCGCTCTATTATTCTTACACCGGAGGGGGATCGGACTGATAAGAGAGATACGAGTGCCTTTAATACATGGAAAGATATAATCATTCCAGGTAATGTCGATGATGGTATGACAAAAACTGGAGCTACCGTGGTCCAGCCTTTGCCTCTGCCTAAAAGGAAGTATTTAGCTAATTATTTAGGACGTGCACAAGGAAAAGCTGGTCGGGTTAAGCTTATAGAGCTTGCAAAGCAGTTTCCAGAGAAGTTGGAATGTCCAGATTTAAAATTCAGTGGACCTGACAAGCTTGCAAGGAAAGAATATTTTGAACACCTACGCAATTCTAAGTTTTGCCTCGCCCCACGTGGAGAGTCATCTTGGACCCTTCGGTTTTATGAGTCCTTTTTTGTGGAATGTGTTCCAGTTATATTATCAGATCAAACAGAATTGCCATTCCAGAATGTCATTGATTACAGTCAGATATCAATAAAATGGCCTTCTAGTCGAATAGGTCCTGAACTATTGCAGTACCTGGAATCTATACCAGATGAAGAAATAGAAAGAATAATAGCTCGTGGTCGAGAAGTTAGGTGCTGGTGGGTGTATGCTTCGGATTCAGAACCTTGTTCGGCAATGCGTGGAATTATGTGGGAATTGCAGAGGAAAGTGAGGCAATTTCACCACTCAGCTGAAACATTTTGGTTGCATAATGGATCAATTGTAAACAGAAACTTGGTTCAATTTTCCAAATGGGAACTCCCTGTGCCTTTGCCTTGA 1323 0.4588 MSASNKWRAMPPHNHQPLCTRTHQIGALLLVTTTFFFTRLLSPCTLSTSVVHLSHPQLQWGQSQLSLKIYVYEPEEINGLNNLLHGRDGKVTEEACLKGQWGTQVKIHKFLLQSKQRTRKKEEADLFFVPSYVKCARMMGGLNDKEINHTYVQVISQMPHFRLSGGRNHIFVFPSGAGAHLFKSWATYINRSIILTPEGDRTDKRDTSAFNTWKDIIIPGNVDDGMTKTGATVVQPLPLPKRKYLANYLGRAQGKAGRVKLIELAKQFPEKLECPDLKFSGPDKLARKEYFEHLRNSKFCLAPRGESSWTLRFYESFFVECVPVILSDQTELPFQNVIDYSQISIKWPSSRIGPELLQYLESIPDEEIERIIARGREVRCWWVYASDSEPCSAMRGIMWELQRKVRQFHHSAETFWLHNGSIVNRNLVQFSKWELPVPLP* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1442 440 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 10 429 IPR004263 GO:0006486|GO:0016757
Vra6g1442 440 PANTHER EXOSTOSIN FAMILY PROTEIN 10 429 - -
Vra6g1442 440 Pfam Exostosin family 66 352 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1442 Vra-Chr6 28327402 28332301 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1442 - - gmx:100814029 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1442 6 28327402 28332301 Vra6g1442 6 28327402 28332301 ECH