Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1421 ATGGCAAAAGTTTGTTGGCCATATTTTGATCCAGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTGTGGACAATGATAGTTGCCATGCTTGTACACTAATCAAGTTTGATAGTATTAACAAACCTGGAATTCTGCTGGAAGTGGTGCAAATCCTGACAGACCTTGACTTCATAATTACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTGTTTCATGTCACCGATCAGCAAGGCAAGAAGATAACAGACAGCAAAACAATAGACTTCATTGAAAAGGCTCTAGGACCAAAGGGCCAGAGCACAGAAGGAGTGAAGAGTTGGCAAGGCAAAAGGGTTGGAGTTCACTCAATTGGTGATCATAAAGCCATTGAAATCATTGGAAGGGACCGCCCGGGTCTCTTGTCTGAGATATCAGCAGTCCTTGCCAGCCTCCAATTCAATGTGATTGCTGCTGAAGTTTGGACTCATAACATGAGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAACCAAGCCATGGATGAATCAAAAAGATTGTCTATTATGGAGGAGCAGCTCAACCACATCCTACGCGTGTGTGAGGATGACGAGAAAGTGGCTAGGACCAGTTTCTCAATGGGTTTGACCCACATGGATCGTAGGCTCCACCAAATGCTATTTGCTGACAGGGACTACGAAAGTGCTGGAGTAACAACAACAGATTGTCCTCCTTCTTTTAGGCCAAAAATCAGAATAGAACGTATTGTGGAAAAAGGGTACTCAGTAGTTACTGTAAGATGCAAAGATCGAGCAAAATTGATGTTTGACATTGTTTGCACTCTCACCGACATGCAGTATGTGGTTTTCCATGCTACAATCTCATCAGAAGGGCAACATGCATCACAGGAGTACTTTATCCGGCATATGGATGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCGTCAAATGCATTGAAGCTGCTATTCAAAGAAGAGTTAGCGAGGGTGTGAGCCTTGAACTGTGTGCAAAGGACAGAGTGGGATTGCTGTCAGAAGTGACAAGGATTCTACGAGAGAATGGCTTAACAGTTAGTAGGGCAGGTGTGTCAACCATTGGGGAGAAAGGGCTAAATGTGTTCTACGTGAGAGATTCATCTGGGAACCCAGTAGACATGAAGATCATCGAAGCATTACGCAAGGAAATTGGACAGACAGTGATGGTCAATGTGAAAAGGGTACCTGGCAGTTCCAAAGCACCAGCTGAAACCCGAGGTTGGGCCAAAACAAGCTTCTTCTTTGGGAACTTGTTTGAAAGGTTCTTGACTTCATAA 1344 0.439 MAKVCWPYFDPEYENFSNRINPPRVSVDNDSCHACTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKGQSTEGVKSWQGKRVGVHSIGDHKAIEIIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNMRIACVLYVNDATNQAMDESKRLSIMEEQLNHILRVCEDDEKVARTSFSMGLTHMDRRLHQMLFADRDYESAGVTTTDCPPSFRPKIRIERIVEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSEGQHASQEYFIRHMDGCTLDTEGEKERVVKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVSRAGVSTIGEKGLNVFYVRDSSGNPVDMKIIEALRKEIGQTVMVNVKRVPGSSKAPAETRGWAKTSFFFGNLFERFLTS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1421 447 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 446 IPR040217 -
Vra6g1421 447 CDD ACT_ACR_3 262 336 - -
Vra6g1421 447 Gene3D - 337 417 - -
Vra6g1421 447 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
Vra6g1421 447 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Vra6g1421 447 Coils Coil 174 194 - -
Vra6g1421 447 SUPERFAMILY ACT-like 338 407 IPR045865 -
Vra6g1421 447 ProSiteProfiles ACT domain profile. 342 419 IPR002912 -
Vra6g1421 447 CDD ACT_ACR_1 35 106 - -
Vra6g1421 447 Pfam ACT domain 37 85 IPR002912 -
Vra6g1421 447 Pfam ACT domain 131 164 IPR002912 -
Vra6g1421 447 Pfam ACT domain 342 402 IPR002912 -
Vra6g1421 447 CDD ACT_ACR_4 340 411 - -
Vra6g1421 447 Gene3D - 128 212 - -
Vra6g1421 447 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 446 - -
Vra6g1421 447 SUPERFAMILY ACT-like 126 203 IPR045865 -
Vra6g1421 447 SUPERFAMILY ACT-like 32 106 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1421 Vra-Chr6 28014878 28019972 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1421 - - gmx:100789044 846.269