Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1414 ATGAAAGTGACTTGGAAGAACAACAAAAAGAAACGTTGTTTACCCACGTTGTCTCACTTCACTGACCTTCCCTTCGAGCATAACGACCAACCCCATTCAGAAGATGGCGCGCGTGTTCCCGATCCTGACCAATCTCACGCTGTACAATTGGCGAATGAATTTCAAGCTCAAGGAGATAAGCTGGCTGTGGATGGGAAGTACCAGGAAGCACTAAGTAAATGGGAGGCTGCTCTTGCGTTGGCACCTGATGTTCCAATTTTGCATGAACAAAAAGCCCAAGTTTTACTAGAAATTGGAGACACTTGGAATGCTTTAAAGGCTGCAACTCGAGCGACTGAATTGGACCCATCATGGGCTGAGGCTTGGGTCACACTTGGCAGAACACAACTGAATTTTGGTGAGCCTGATAATGCTATTGAAAGCTTTGACCGAGCTTTAGCTCTAAAGCCTGATTACGAGGAAGCTAAAGAAGATAGGAAAACCTCTTTACATCTTGTAAAGAAGAGAAAGCAACTTCATTCATCTGGCTTGAGTGACACTCAAAATCGTTATGTGGTGGGTGAAAAGGATGAAAGCCAGTGA 582 0.4467 MKVTWKNNKKKRCLPTLSHFTDLPFEHNDQPHSEDGARVPDPDQSHAVQLANEFQAQGDKLAVDGKYQEALSKWEAALALAPDVPILHEQKAQVLLEIGDTWNALKAATRATELDPSWAEAWVTLGRTQLNFGEPDNAIESFDRALALKPDYEEAKEDRKTSLHLVKKRKQLHSSGLSDTQNRYVVGEKDESQ* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1414 193 ProSiteProfiles TPR repeat region circular profile. 119 151 - -
Vra6g1414 193 PANTHER OSMOSIS RESPONSIVE FACTOR 1 191 - -
Vra6g1414 193 Pfam Tetratricopeptide repeat 91 152 - -
Vra6g1414 193 ProSiteProfiles TPR repeat profile. 119 152 IPR019734 GO:0005515
Vra6g1414 193 SMART tpr_5 119 152 IPR019734 GO:0005515
Vra6g1414 193 SMART tpr_5 51 84 IPR019734 GO:0005515
Vra6g1414 193 SMART tpr_5 85 118 IPR019734 GO:0005515
Vra6g1414 193 MobiDBLite consensus disorder prediction 25 41 - -
Vra6g1414 193 Gene3D Tetratricopeptide repeat domain 41 189 IPR011990 GO:0005515
Vra6g1414 193 MobiDBLite consensus disorder prediction 21 43 - -
Vra6g1414 193 SUPERFAMILY TPR-like 50 170 IPR011990 GO:0005515
Vra6g1414 193 MobiDBLite consensus disorder prediction 170 193 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1414 58 163 EF-hand Containing Proteins AT2G32450 30.189 9.19e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1414 - - pvu:PHAVU_001G066600g 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1414 6 27852924 27857940 Vra6g1414 6 27852924 27857940 ECH