Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1412 ATGAAGTCCCTATGGTCAATGGATTTTCTCAAAACCTCTTCATGTGTTAGAGTCACCACTCTCACACTCTTCTCCCTCACCCTCTTTCTCTTCCTCTTCACGCATTTCTCCCCCGCCTCTTACTCTTCCTTCGCTTTCTCCTCTTCTGCCGCCGTCGATGCACCCTCGCCGGAGCAGCCACCACCACCACCTCCTCCTCCTCCGCCGACTCCGCTGGCGATGCCGCCTCATCATCCGGAGCCGAAAGTGTTTCCTGAACCGCCGTTACCGCCGGTGGAGCGAATGGGGGTGTTGGACGGGAACGGCGTGATGACGGAAGATTTCAGAGTGGGGGAGTTAGATCCGGGTTTGGAGGAGGAAGGGCAAAACGGCAGCGTTTCTGTAAAGGAGAGTGGTGGTGTGAAGGAGAAAGTGGAGAAGTATAAGGTGTGTGATGTGAGGATGGTGGATTTTGTGCCTTGTTTGGATAATGAGGAAGCGATGAAGAAGTTGGAAGGGAGCGTGAGAGGGGAGAAGTACGAGCGGCATTGCCCCCAAGAAGGGATGGGCCTCAACTGTCTAGTTCCGCCGCCCAAGGGTTACCGGCGGCCCGTACTTTGGCCCAAAAGCAGAGACGAGGTTTGGTTTAGTAATGTACCCCATACACGTTTGGTTGAGGATAAAGGTGGGCAAAATTGGATATCAATAAAGAATGATAAATTTGTTTTTCCTGGTGGTGGAACTCAGTTTATACATGGTGCAGATAAATACCTGGATCAGATTTCTGAGATGGTTCCTGACATTTCATTTGGTAAAAACATCAGAGTTGCATTAGACGTTGGCTGTGGAGTGGCAAGTTTTGGTGCCTTTTTGATGCAACGTAATGTGACCACTCTTTCAATAGCTCCAAAAGATGTTCATGAAAATCAGATTCAATTTGCACTTGAGCGAGGTGTGCCTGCCATGGCAGCAGTATTTGCTACACGTCGTTTATTATTCCCAAGCCAGGCATTTGATCTCATCCATTGCTCAAGATGCAGAATTAATTGGACTCGTGATGATGGAATTTTGCTTCTTGAGGCCAACAGGCTCCTGAGAGCAGGTGGCTACTTTGTCTGGGCAGCACAGCCTGTTTACAAACATGAAGAGGCCCTTCAAGAGCAATGGAAAGAAATGGAGAACTTGACAACTCACATTTGTTGGGAACTTGTACAAAAGGAGGGTTATATTGCTATATGGCAGAAGCCTATGAACAATAATTGCTACCTTAGTCGAGACATGGCTGAGCATCCTCCATTATGTGAGTCCAATGACGATCCAGATAATGTTTGGTATGTCAACCTTAAGGCTTGCATCACTGAAATACCTAGTAATGGATTTGGAGCAAATGTTACAGAGTGGCCTTTGCGTCTCCATGAACCACCAAAAAGGCTCCAAAGCATCCAATTGGATGCCATTGTATCCAGAGATGAACTTTTCAGGGCTGATACAAAATATTGGTTTGAAATAATGGAAAGTTACGTTCGGGCTTTCCGTTGGAAGGAGTATAACCTGAGAAATGTAATGGACATGAGGGCAGGATTTGGAGGGGTTGCTGCTGCACTGCTTGATCTCGGTATTGACTGTTGGGTTATGAATGTTGTCCCTGTTAGTGGATTCAATACATTGCCTGTTATATATGACCGTGGGCTGATAGGAGTTGTGCATGATTGGTGTGAACCATTTGACACCTACCCTAGAACATATGATCTGCTGCATGCAGCAGGTCTTTTCTCTGTTGAAAAGAAGAGGAATAAGTGTAACATCTCAAGCATTATGCTTGAGATGGATCGGATGCTAAGACCAGGAGGGCGTGTATATATACGTGACACCACATTTATTATTGGTGAACTTGAAGAAATTGCAACTGCATTGGGATGGTCAAGTTCCCTAAATGATGTAGGAGAGGGTCCCTATTCAAGTTGGAAGATATTAAGGTCTGAGAAACCATTCTGA 1974 0.463 MKSLWSMDFLKTSSCVRVTTLTLFSLTLFLFLFTHFSPASYSSFAFSSSAAVDAPSPEQPPPPPPPPPPTPLAMPPHHPEPKVFPEPPLPPVERMGVLDGNGVMTEDFRVGELDPGLEEEGQNGSVSVKESGGVKEKVEKYKVCDVRMVDFVPCLDNEEAMKKLEGSVRGEKYERHCPQEGMGLNCLVPPPKGYRRPVLWPKSRDEVWFSNVPHTRLVEDKGGQNWISIKNDKFVFPGGGTQFIHGADKYLDQISEMVPDISFGKNIRVALDVGCGVASFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPAMAAVFATRRLLFPSQAFDLIHCSRCRINWTRDDGILLLEANRLLRAGGYFVWAAQPVYKHEEALQEQWKEMENLTTHICWELVQKEGYIAIWQKPMNNNCYLSRDMAEHPPLCESNDDPDNVWYVNLKACITEIPSNGFGANVTEWPLRLHEPPKRLQSIQLDAIVSRDELFRADTKYWFEIMESYVRAFRWKEYNLRNVMDMRAGFGGVAAALLDLGIDCWVMNVVPVSGFNTLPVIYDRGLIGVVHDWCEPFDTYPRTYDLLHAAGLFSVEKKRNKCNISSIMLEMDRMLRPGGRVYIRDTTFIIGELEEIATALGWSSSLNDVGEGPYSSWKILRSEKPF* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1412 657 Gene3D Vaccinia Virus protein VP39 247 417 IPR029063 -
Vra6g1412 657 PANTHER METHYLTRANSFERASE PMT12-RELATED 78 655 - -
Vra6g1412 657 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 150 655 IPR004159 GO:0008168
Vra6g1412 657 MobiDBLite consensus disorder prediction 55 92 - -
Vra6g1412 657 MobiDBLite consensus disorder prediction 51 98 - -
Vra6g1412 657 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 78 655 IPR004159 GO:0008168
Vra6g1412 657 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 174 393 IPR029063 -
Vra6g1412 657 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 495 633 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1412 Vra-Chr6 27820749 27830527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1412 - - pvu:PHAVU_001G067200g 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1412 6 27820749 27830527 Vra6g1412 6 27820749 27830527 ECH