LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra6g1399	ATGTGGAGAGAGAGAGCATTGATAGTGTTGGTGGTTCTACTCCACCAAATTTATGGAGGAGATGGTTGCTCCCCTTCTTCCTGTGGCAAAATCAGCAACATATCTTATCCATTCCGATTGCAAGGAGACCCAAAAGTGTGCGGTCGGTTTGAGTTATCTTGTGAAAACAATATAACTGTGTTATCTCTGTTATCTGGAACATTTCATGTAGAGGCCATGAACTACAATAATTTCACAATCCGGCTGGTGGATCCTGGACTTCAACCAACAAACTGCTCCTCCCTTCCTCGCTATTCCCTGTCTCCAACCAATTTCACTGACGACGACTTGCGTCCCTACGGTAGATGGTATATGTCTGGTTGGTCTTATGAAGACGTTTTTTACGAGCATATAGTATTTTTGAATTGTAGCCATCCAGTGTATGGGAAGCGTAATTACGTGGATACTGGTGGATGCGTGAATTGGGAGTCCAAAGGTTACATATACGCTATGGCTGTTAGTGACCTATTAGGAAAGGACTTGGAAGTTGGTTGTCAAGTAAAGCTGGTTTCTCCCATATCTTGGTGGGGTTTGGAAACAAATGGATATTCCTATGCCACGATCCACACAGCGCTACTTTATGGATTTCAGGTTTCATGGATTCGTCTCGTCTGTGAGGGTCGTTGTACACACATCGACTTATGCCATTTCAGTATGAACCAGAGGCTTGAATGCTACGGTGAAGCGACACCTACGGGGCCGGTGTACGTTTAG	753	0.4462	MWRERALIVLVVLLHQIYGGDGCSPSSCGKISNISYPFRLQGDPKVCGRFELSCENNITVLSLLSGTFHVEAMNYNNFTIRLVDPGLQPTNCSSLPRYSLSPTNFTDDDLRPYGRWYMSGWSYEDVFYEHIVFLNCSHPVYGKRNYVDTGGCVNWESKGYIYAMAVSDLLGKDLEVGCQVKLVSPISWWGLETNGYSYATIHTALLYGFQVSWIRLVCEGRCTHIDLCHFSMNQRLECYGEATPTGPVYV*	251

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra6g1399	250	Pfam	Wall-associated receptor kinase galacturonan-binding	23	84	IPR025287	GO:0030247
	Vra6g1399	250	PANTHER	OS01G0690200 PROTEIN	5	222	-	-
	Vra6g1399	250	PANTHER	OS01G0113900 PROTEIN	5	222	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra6g1399	Vra-Chr6	27498915	27505336	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra6g1399	23	213	Receptor kinase-like Gene Family	AT5G38260	25.490	6.29e-06	45.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra6g1399	-		-	var:108337757	352.058