Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1396 ATGGTAGCATGCATCGACATGGCATTCTCGGCGGACATGGCCGCGGCTCTGTCACCTTCGTATCATTGTTTCTTCAAGCCTCCTCCGTCGTTCTTGGGCCTGGGCCTGGGCCTGGAGTTTCAGAGGAAGGGAAGAAAGCTCCGTAGACACTTCAACTTGGTCATCAGCGCCCAACTTTCCAACTCTTTTTCCTTCAGCTTCGGTCTCGACTCTCCGAATTTGAATTCCTTCCAATCCAATGATACATCACGGTTGTCTTGGATGGGTCCAGTTCCAGGTGATATTGCTGAAGTTGAGGCGTTTTGTAGGATCTTTAGGAATTCAGAAAGGCTTCATTCTGCATTAATGGATGCATTATGTAACCCATTGACTGGTGAGTGTAGTGTTTCATATGAGGTTCCATCAGATGAGAAACCTCAACTAGAAGACAAAATAGTTTCTGTTCTTGGATGCATGGTATCCCTTGTGAACAAAGGAAGGGAGGATATTCTTTCTGGAAGATCCTCAATTATGAATTCCTTTCGTGCTGCAGATGTCAGCACAACAGATGATAAGCTCCCCCCACTAGCCCTTTTTAGGAGTGAGATGAAAAGGTGTTGTGAGAGCTTGCATGTAGCTCTCGAAAACTATTTAGAACTTGATGATGATCGAAGCTTAAATGTATGGAGGAAACTTCAAAGACTGAAGAATGTCTGCTATGATTCTGGTTTTCCTCGTGGGGAGGGTTTTCCTTGTCACATGCTATTTTCAAATTGGAATCCTGTATATTTATCTGCTTCTAAAGAGGACATGGAAACCAAAGACACAGAAGCAGTCTTTTGCACTGGTGGTCAGGTAACAGAAGAAGGCCTGAAGTGGTTACTGGATAAAGGATATAAAACCATCATAGATCTTAGAGCAGAGACTGTGAAAGACAACTTCTATCAAGCAGCTTTACATGATGCCATTTCATCTGGAAGAATTGAATTGGTTAAAATCCCTGTTGAAGCTAGGACTGCACCTACAATGGAGCAGGTTGTGAGGTTTGCATCTTATGTTTTAAATGGCAGCAAAAGGCCTATCTATCTTCACAGCAAGGAAGGAGTTTTAAGAACATCTGCCATGGTCTCCCGATGGAGGCAGTACATGACTCGATCTTCATCACAGATTGTTTCTAATCCACCAGTTACACCCTATGACATGTTATCACGTTATACAATCGGGTCTGCTAGACTTCTGGATTCTTCAATAACTGCAGAGAGATCCTCCCTGGAAAAAGATTTCAATTCATTGTCCGAGAATTTGAACTCAACACGTAGTTCTGTTGGTGCATTTGACAAAAGCACCTCTCAAAAGAAGTATAACGGTGAAGCAGAAGGTACTACAGTCTTGAGTGAAGTTTCTACTGATAACAGGGAATTATCAGAAGCAACTGGTGCTAATGAGGAAGGATCTTTTCCAAGTGACTTCAGCAAAATTAACCCTTTAAAATCTCAACTTCCTCCTTGTGATATCTTTTCCAAAAGAGAGATGTCAAAATTTTTGGCAAGCCGGAAGATCTCACCGCCCTCTTATGTCAATTATCAGAGTAGAAGGTTGGAAGGCTCTCTGCAACAGAGGAACATGAATATAACAAAACAACAGGGAGGTGTGGGTGTCAGCAGTAGTGATAATCCCATACCTAAAATAGTAGGTCCAGAAAGTTCAAATGGATCAGCCCATGTGGACTATCCATCTAGAAAGTCCCAGATTACAGTTGATGGCAATAGGAAGTTAAGGAACAGGAGTACTTCTAGTTCTGTTAGGACAACAATAAATGGATTTAGTGACCATGAATACATGACTAACGGCAATGGTTCCAACACTGTGAAGAATAATTTTGATAATGTCGCAGCTAACTCTCAAAGGATTGAAGATCGTATGGTTAAAGATAGGTTAGCCTTAAATGATGATGACTTGGGATCCATCGAAGGAGATATGTGTGCTTCTTCAACAGGAGTTGTAAGAGTGCAATCAAGAAAGAAGGCTGAGATGTTCCTAGTTCGAACAGATGGATTTTCTTGTACCAGAGAAAAAGTGACCGAATCTTCTTTGGCTTTCACTCATCCTAGCACCCAGCAGCAGATGCTTATGTGGAAGTCTATGCCGAAGAATGTATTATTGTTAAAAAAACTTGGAGATGAACTAATGGAAGAAGCAAAAATGGTTGCCACTTTTCTTCATCGCCAAGAGAAAATGAATGTTCTTGTGGAACCTGATGTACATGACGTATTTGCTAGAATTCCAGGCTTTGGATTTGTTCAGACCTTCTACAGTCAAGATACCAGTGATCTACATGAAAAAGTAGACTTTGTGGCATGCTTGGGTGGAGATGGCGTTATATTGCATGCATCAAATCTTTTCAGAGAAGCGGTTCCCCCTATTGTGTCATTTAACCTAGGCTCCCTTGGTTTTCTAACTTCTCATGATTTTGATGATTACAAACAAGACTTACGACAAGTCATCCATGGAAATAATACACGAGATGGTGTGTATATTACTCTCAGAATGCGTCTCCGGTGTGAAATTTTTCATAAAGGTAAAGCTATGCCAGGGAAAGTATTTGACATCCTCAATGAGGTTGTGGTTGACCGGGGCTCCAATCCTTACCTTTCAAAGATTGAATGCTATGAACATGATCGACTTATAACCAAAGTACAAGGTGATGGAGTTATCGTGGCCACCCCAACAGGAAGTACAGCCTACTCTACTGCTGCTGGAGGTTCCATGATTCCAGACGATGCAAGAAGTAATGCCTGGGTTTCATTTGATGGGAAGAGAAGGCAGCAACTCTCGAGAGGTGATTCTGTCCGAATATCTATGAGTCAACATCCCCTTCCAACTGTTAACAAGTTTGACCAAACGGGTGATTGGTTCCATAGCTTGATTCGCTGCCTAAATTGGAACGAGAGGCTTGATCAAAAGGCTCTGTGA 2952 0.4197 MVACIDMAFSADMAAALSPSYHCFFKPPPSFLGLGLGLEFQRKGRKLRRHFNLVISAQLSNSFSFSFGLDSPNLNSFQSNDTSRLSWMGPVPGDIAEVEAFCRIFRNSERLHSALMDALCNPLTGECSVSYEVPSDEKPQLEDKIVSVLGCMVSLVNKGREDILSGRSSIMNSFRAADVSTTDDKLPPLALFRSEMKRCCESLHVALENYLELDDDRSLNVWRKLQRLKNVCYDSGFPRGEGFPCHMLFSNWNPVYLSASKEDMETKDTEAVFCTGGQVTEEGLKWLLDKGYKTIIDLRAETVKDNFYQAALHDAISSGRIELVKIPVEARTAPTMEQVVRFASYVLNGSKRPIYLHSKEGVLRTSAMVSRWRQYMTRSSSQIVSNPPVTPYDMLSRYTIGSARLLDSSITAERSSLEKDFNSLSENLNSTRSSVGAFDKSTSQKKYNGEAEGTTVLSEVSTDNRELSEATGANEEGSFPSDFSKINPLKSQLPPCDIFSKREMSKFLASRKISPPSYVNYQSRRLEGSLQQRNMNITKQQGGVGVSSSDNPIPKIVGPESSNGSAHVDYPSRKSQITVDGNRKLRNRSTSSSVRTTINGFSDHEYMTNGNGSNTVKNNFDNVAANSQRIEDRMVKDRLALNDDDLGSIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSMPKNVLLLKKLGDELMEEAKMVATFLHRQEKMNVLVEPDVHDVFARIPGFGFVQTFYSQDTSDLHEKVDFVACLGGDGVILHASNLFREAVPPIVSFNLGSLGFLTSHDFDDYKQDLRQVIHGNNTRDGVYITLRMRLRCEIFHKGKAMPGKVFDILNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMIPDDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1396 983 MobiDBLite consensus disorder prediction 441 486 - -
Vra6g1396 983 Gene3D - 706 858 IPR017438 -
Vra6g1396 983 Gene3D - 859 927 IPR017437 GO:0003951|GO:0019674
Vra6g1396 983 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 714 978 IPR016064 -
Vra6g1396 983 Pfam ATP-NAD kinase C-terminal domain 864 917 - -
Vra6g1396 983 PANTHER NAD/NADH KINASE FAMILY PROTEIN 41 917 - -
Vra6g1396 983 PANTHER NAD/NADH KINASE FAMILY PROTEIN 917 983 - -
Vra6g1396 983 PANTHER NAD KINASE 917 983 - -
Vra6g1396 983 PANTHER NAD KINASE 41 917 - -
Vra6g1396 983 Pfam ATP-NAD kinase N-terminal domain 749 830 IPR002504 GO:0003951|GO:0006741
Vra6g1396 983 Gene3D Protein tyrosine phosphatase superfamily 265 396 IPR029021 -
Vra6g1396 983 MobiDBLite consensus disorder prediction 441 468 - -
Vra6g1396 983 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 273 384 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1396 Vra-Chr6 27397222 27409798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1396 K00858 - gmx:100782844 1686