Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1346 ATGAAACCCAAAGCCGGAGGAAATGGCCTTGCCAGTGAGGCCAGCGGCGGTGGAGGTGGAAGCAGCAGCTCTCCTAGCCCGCCGCCGTCGCCGAGGCGGCAATCCGGTGTTACGCGGTGCCGGAGGAGGCTGAGACCGGCGAAGGAATCGTCGGAGAGTCGGCGGCTGGTCGCTGTCATAATGGCGCGGCGGAGCCTCCGGTACTTTTTCCTGCTGCCGTTGGTGTACATCTCCGGGTTGTTGATGTGTGTGGGGCCCTTCTCCGTCCTCATTGGCCACTCACCTCTTCCTGGTTCTCGGTACCGCAGTCACGAGATCTTCCACAACCTCTGGCACCATATCGAAACCGATAATTCCTCTGTCATCGAGTTGGCTTCTGTGTGGAAGTACAAAAGGAAGTTGAGAGAGCAAAAGCCTTGTCCGAATTTGACAGCTTTGCATCGCGAACATTTTATGTCGCCTGGACTGAATGGTTTTTTGATTGTGGAAGCCAACGGGGGTCTTAACCAACAACGCTCTGCGATTTGTAATGCTGTGGCTGTGGCTGGACTCCTGAATGCAATATTAGTTATACCTCAATTTGAGTTTCACAATGTGTGGAAAGATCCAAGTGAATTCGGGGATATATATGATGAAGATCTTTTTATATCCACACTTGATGGTTATGTGAAGGTGGTCAGAGAACTGCCCGAGGCACTAATGGAGCGGCACAATTACAATATGAGTAATATCACTAACATCAAAGTTCAAGCTTGGTCTCCTGTCAGTTATTACCTTGGAGTTGTTTCTCCTATCTTGCAAAAGGAAGGGGTAATTCGAATAGCTCCATTTGCCAATCGTTTGGCGATGAGTGTTCCGCCACACATTCAATTTCTAAGATGTCTTACTAATTATAAAGCATTGAGGTTTTCTTCTTCAATATCTGCACTAGCAAACAAATTAGTTTACCGAATGATTCAGAAGAGCTCAAGGACAGATGGAAAATACATTGCCGTGCATCTTCGTTTTGAAGAGGATATGGTGGCATTCTCTTGTTGTGTATATGATGGAGGAGAGGCAGAAAAGTTGGAAATGGATTCAGTTCGAGAAAAAGGGTGGAGGGGTAAATTTAAAAGAAAGGACCGGATAATTTTTCCTGATCTTAATCGGGTTGAAGGAAAATGCCCACTAACCCCACTAGAGGTTGGTATGATGCTGCGTGGCATGGGATTTGATAACAATACTGCAATATATTTAGCTTCTGGGAAAATATATCGTGCAGAGAGATATTTGGCTCCTTTGATGAAGATGTTTCCCTATCTGTATACAAAGGAATCTCTTGCAACATCAGATGAGCTTGCTCCTTTTATGGGCTATTCCTCCCAATTAGCTGCACTGGACTACACAGTATGCTTGTCTAGTGAGGTTTTTGTAACAACTCAGGGTGGTAACTTCCCTCATTTTTTGATGGGCCATAGAAGATTCCTCTATGATGGCCATGCTAAGACGATTATCCCAGATAAGCGCAAGCTTGTTGTTCTTTTGGATAACTTGAGTATTAGTTGGAGAGCTTTCAAGGATCAGATGGAAGACATGCTCAGTGAAAGTGACCGCAAAGGAATCATGGTACCTAGAGTTAGAAAAATAAACCGAAAAACTTCTGTCTACACGTACCCCTTACCAGAATGCAGGTGCCTACAGCAGTCTCTTGCCAATCAAATTGCCCACAATCTTGACGCTCTGTATAATTACAACAGAACAAAAGCTTAA 1749 0.4523 MKPKAGGNGLASEASGGGGGSSSSPSPPPSPRRQSGVTRCRRRLRPAKESSESRRLVAVIMARRSLRYFFLLPLVYISGLLMCVGPFSVLIGHSPLPGSRYRSHEIFHNLWHHIETDNSSVIELASVWKYKRKLREQKPCPNLTALHREHFMSPGLNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPQFEFHNVWKDPSEFGDIYDEDLFISTLDGYVKVVRELPEALMERHNYNMSNITNIKVQAWSPVSYYLGVVSPILQKEGVIRIAPFANRLAMSVPPHIQFLRCLTNYKALRFSSSISALANKLVYRMIQKSSRTDGKYIAVHLRFEEDMVAFSCCVYDGGEAEKLEMDSVREKGWRGKFKRKDRIIFPDLNRVEGKCPLTPLEVGMMLRGMGFDNNTAIYLASGKIYRAERYLAPLMKMFPYLYTKESLATSDELAPFMGYSSQLAALDYTVCLSSEVFVTTQGGNFPHFLMGHRRFLYDGHAKTIIPDKRKLVVLLDNLSISWRAFKDQMEDMLSESDRKGIMVPRVRKINRKTSVYTYPLPECRCLQQSLANQIAHNLDALYNYNRTKA* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1346 582 MobiDBLite consensus disorder prediction 1 48 - -
Vra6g1346 582 Pfam GDP-fucose protein O-fucosyltransferase 159 488 IPR019378 -
Vra6g1346 582 PANTHER - 23 564 IPR024709 -
Vra6g1346 582 PIRSF UCP009360 32 562 IPR024709 -
Vra6g1346 582 PANTHER O-FUCOSYLTRANSFERASE 10-RELATED 23 564 - -
Vra6g1346 582 CDD O-FucT_plant 159 496 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1346 Vra-Chr6 26246911 26257511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1346 158 558 Miscellaneous Gene Families AT1G22460 38.554 6.05e-89 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1346 - - gmx:100812590 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1346 6 26246911 26257511 Vra6g1346 6 26246911 26257511 ECH