Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1332 ATGTCAATGGCTGCTCCACACTTTCACAGTAGCATTCAGGTTTTTGCACTCTTCCATTTAATACTTATCTTCTCCTCGCTCCTCCACACGGCAACCGCAACCCCAAGTCACCAACAAGAACAAGAAGAAGACACTCCCGTCACACGCTTCCAGCGCTACCTCCGCATCAACACGGCCCACCCCGCCCCTGACTACTACTCCGCAGTCTCCTTCCTCAAAGCCCAAGCCCATTCCTTGGGCCTCACCTCCAACACCTTCGAGTTCACCCCTGGCAAGCCCCTCCTCCTCCTCACCTGGCCCGGCTCAAACCCCTCCCTCCCCTCGATCCTACTCAACTCCCACCTCGACTCCGTCCCCGCCGAGCCCGCCAAGTGGCTCCACCCACCCTTCTCCGCCCACCGCACTTCCGACGGCAAAATTTTCGCCCGCGGCGCCCAGGACGACAAATGCATCGCGGTCCAGTACCTTGAGGCTATCCGCAACCTCAAGGCCCGCGCCTTCTCTCCCCTCCGCTCCGTCCACATCTCCCTCGTCCCCGATGAGGAGATAGGTGGCTTAAACGGCGCCGCCAAGTTCGTCGAGTCCGATGACTTCCTCCGCCTCAACGTTGGTTTCGCGCTCGACGAGGGGCAGGCCACGCCTGGCGACGAATTTAGGGTTTTCTACGCGGATAGGATTCCGTGGAACGTGATAATCCGGGCCAAGGGAGTGCCCGGGCACGGGGCGAGAATGTACGATGGGAGTGCGATGGAGAATCTGATGGAGAGTATGGAGGCTGTGAGTAGGTTCCGGGAGAGCCAGTTTGACGTGGTTAAGGCTGGGAAAGCGTTGAACGGCGAGGTTGTGTCGGTGAATCCAGTTTATGTTAAGGCTGGTGTTACTTCTGATGACGGCTTTGCGATGAATGTGCAACCTTCGGAGGCGGAGGCTGGTTTTGATCTAAGGCTGACGCCTACGACGGACCCGGACGAGATGAGGAGGAGAATTGCAAAGGAATGGGCTCCGGCTGTTAGAAATATGTCGTATGAGATTACTGAGAAAGGACCCATCAGAGACTACATGGGACGCCCGATAATGACTGCAACTAATGATTCCAATCCATGGTGGTCAGTTTTCAAGCAAGCTATCACATCTATTGGAGAAAAACTCTCTAGTCCTGAAATTCTTGCATCCACAACTGATGCAAGATACCTCAGACAGAAAGGAATTCCTGCACTCGGTTTTTCCCCAATGAAAAATACTCCCATCTTGCTTCATGATCACAACGAGCACTTAAAAGATACCGTGTTCATGAAGGGAATACAGGTGTACGAGTCTCTTATAAGTTCCTTAAGTACATTTACCGAAGCTTCATATTAG 1359 0.5394 MSMAAPHFHSSIQVFALFHLILIFSSLLHTATATPSHQQEQEEDTPVTRFQRYLRINTAHPAPDYYSAVSFLKAQAHSLGLTSNTFEFTPGKPLLLLTWPGSNPSLPSILLNSHLDSVPAEPAKWLHPPFSAHRTSDGKIFARGAQDDKCIAVQYLEAIRNLKARAFSPLRSVHISLVPDEEIGGLNGAAKFVESDDFLRLNVGFALDEGQATPGDEFRVFYADRIPWNVIIRAKGVPGHGARMYDGSAMENLMESMEAVSRFRESQFDVVKAGKALNGEVVSVNPVYVKAGVTSDDGFAMNVQPSEAEAGFDLRLTPTTDPDEMRRRIAKEWAPAVRNMSYEITEKGPIRDYMGRPIMTATNDSNPWWSVFKQAITSIGEKLSSPEILASTTDARYLRQKGIPALGFSPMKNTPILLHDHNEHLKDTVFMKGIQVYESLISSLSTFTEASY* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1332 452 SUPERFAMILY Zn-dependent exopeptidases 44 445 - -
Vra6g1332 452 Gene3D Zn peptidases 36 229 - -
Vra6g1332 452 Pfam Peptidase family M20/M25/M40 110 442 IPR002933 GO:0016787
Vra6g1332 452 Pfam Peptidase dimerisation domain 229 331 IPR011650 -
Vra6g1332 452 PANTHER PUTATIVE-RELATED 29 450 - -
Vra6g1332 452 CDD M20_AcylaseI_like 43 445 - -
Vra6g1332 452 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 39 446 IPR010159 GO:0004046|GO:0005737|GO:0006520
Vra6g1332 452 SUPERFAMILY Bacterial exopeptidase dimerisation domain 229 344 IPR036264 -
Vra6g1332 452 Gene3D - 366 446 - -
Vra6g1332 452 PANTHER AMINOACYLASE-1 29 450 - -
Vra6g1332 452 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 145 184 IPR001261 -
Vra6g1332 452 PIRSF ACY-1 36 449 - -
Vra6g1332 452 Gene3D - 230 338 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1332 K14677 - gmx:100817383 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1332 6 25868571 25875260 Vra6g1332 6 25868571 25875260 ECH