Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1331 ATGGCTCGGAGCATAACGGACCTTGGAACTGGGGCGTCTCTGGTGGTGTTGTTCTTATGCTTAACTACACACTTTTCGGTGCTCCCACTTGCAGAGGCAGTATGGTTTACAATCCCCACTACGGGGACTAAGTGCATGTCCGAGGAAATCCAGAAAAATATTGTTGTTTTAGCCGATTACTATGTTGTCACTGATGGCGGTCCCCAGCTCAGCACAGTTTCTGTCAAGGTAACATCTCCTTATGGGAATAGCCTTTACGACAATCAAAATGCTACACAAGGTCAATTTGCATTTACAACGGAGGAGAGTGGGAACTACGTGGCGTGCTTTTGGATGGATAGTAAACATGAACAAGAAGCAACTTTGAGCCTTGAATGGAAAACTGGAATTGCTGCCAAAGATTGGGAGTCCGTTGCAAAGAAAGAGAAGATCGAGGGTGTTGAACTCGAGCTCAGGAAACTTGAAGGAGCAGTACAAGCCATCCATGGTTATCTAGTTTATATGAAGGATAAGGAAGCAAGGATGAGAGAAGTCAGTGAAAAAACGAATAGCAGAGTTGCTTGGTATAGCATCATGTCTCTTGGTATCTGCGTTTTGGTTTCTTTATTACAAGTGTGGCATCTGAAGCGTTTTTTTCTGAAGAAGAAACTGATATAG 657 0.4368 MARSITDLGTGASLVVLFLCLTTHFSVLPLAEAVWFTIPTTGTKCMSEEIQKNIVVLADYYVVTDGGPQLSTVSVKVTSPYGNSLYDNQNATQGQFAFTTEESGNYVACFWMDSKHEQEATLSLEWKTGIAAKDWESVAKKEKIEGVELELRKLEGAVQAIHGYLVYMKDKEARMREVSEKTNSRVAWYSIMSLGICVLVSLLQVWHLKRFFLKKKLI* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1331 218 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 12 218 IPR015720 -
Vra6g1331 218 SMART EMP24_GP25L_2 33 213 IPR009038 -
Vra6g1331 218 ProSiteProfiles GOLD domain profile. 43 153 IPR009038 -
Vra6g1331 218 Pfam emp24/gp25L/p24 family/GOLD 33 212 IPR009038 -
Vra6g1331 218 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 12 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1331 Vra-Chr6 25852535 25855003 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1331 K20352 - gmx:100799948 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1331 6 25852535 25855003 Vra6g1331 6 25852535 25855003 ECH