Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1324 ATGGTAATGTGGGTATTTGGGTATGGTTCCTTGATCTCCAAAGCTGGGTTTCACTATGATGAACGTGTTATTGGTTTCATCAAAGGCTATCGACGTGTCTTCTACCAAGGCTCTACTGATCACAGAGGGACCCCTGAGTTCCCTGGAAGAACAGTGACCCTGGAGCCTGCTCCAGGAGAAATATGTTGGGGAGCTGCTTACAAGATCTCAAAGGAAGAAGATGCAGAAACTGCATTAACATATCTGGAAGTAAGGGAGAAGCAATACGACAAAAAGGAATACCTTGATTTTTATACTGACCTTACTGCTACATCTCCAGCGGTTTCCGGAGTGATGGTATATATAGCAACTGCAGACAAGAAAGCTAATGTAAATTATTTGGGCCCTGCTTCTGATGAAGAGATTGCGAGGCAAATAATTCAGGCTGAAGGACCTGCAGGACCCAACAGAGATTATCTTTTCAATCTTGAAAAGGCTCTTCTTCAAATAGGATGCAAAGACAAACATGTCATTGATCTCGCAAATGAAGTCAGGCGTATTCTCGAAGAGGAACAATGA 558 0.4301 MVMWVFGYGSLISKAGFHYDERVIGFIKGYRRVFYQGSTDHRGTPEFPGRTVTLEPAPGEICWGAAYKISKEEDAETALTYLEVREKQYDKKEYLDFYTDLTATSPAVSGVMVYIATADKKANVNYLGPASDEEIARQIIQAEGPAGPNRDYLFNLEKALLQIGCKDKHVIDLANEVRRILEEEQ* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1324 185 Gene3D - 2 183 - -
Vra6g1324 185 Pfam ChaC-like protein 3 179 IPR006840 GO:0003839|GO:0006751
Vra6g1324 185 CDD GGCT_like 5 116 IPR013024 -
Vra6g1324 185 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 2 184 IPR006840 GO:0003839|GO:0006751
Vra6g1324 185 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 1 118 IPR036568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1324 Vra-Chr6 25556056 25560016 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1324 K22596 - gmx:100305985 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1324 6 25556056 25560016 Vra6g1324 6 25556056 25560016 ECH