Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1318 ATGCAAGGTTCAACAGGGTCATTATTGAAGCAATTTAGTGTGAAAGAGGCTTGGAAATCAACATCAAGTAGGTGGGGTGGGATGGAGGATGGGTATGAGACTAGTTTGAGCCAAATGGAAGGTTTTTCCATGTATGGGAATGAGGACAGTGGGATGGTGGGGAAAAAGAGAGTCATGGTGGTGGTAGATCATACTTCACATTCCAAACATGCAATGATGTGGGCACTCACTCATGTAGCTAATAAGGGTGATTTGCTCACTTTGCTTCTTGTTGTACCCCCTCATAAGGCCTCTCAATCTTCCTGCTCTACCTTTCTAGTCAATCATCTTGGTTCCCTTTGCAAAGATTGCAAGCCAGAGGTGGAAGTGGAAGCACTTGTGATCCAAGGACCAAAACTGGCCACAGTGATGAGTCAAGTGAAGAAGCTGGAGGTTTCAATCTTGGTATTGGGCCAAAAGAAACCCTCTCCTCTTCTTAGCTGCTTGTGTGGAAACAACAGTATAAGCAGCTCAGAGGAGTTTGCTGAGTATTGCATCAACAATGCAGAGTGCTTGGCAATTGGAGTGAGAAAGAGAAGTCAAGGCAACAATGGCTACCTTATTAGCACGAGGTGGCAGAAGAACTTCTGGCTACTGGCTTAG 642 0.4533 MQGSTGSLLKQFSVKEAWKSTSSRWGGMEDGYETSLSQMEGFSMYGNEDSGMVGKKRVMVVVDHTSHSKHAMMWALTHVANKGDLLTLLLVVPPHKASQSSCSTFLVNHLGSLCKDCKPEVEVEALVIQGPKLATVMSQVKKLEVSILVLGQKKPSPLLSCLCGNNSISSSEEFAEYCINNAECLAIGVRKRSQGNNGYLISTRWQKNFWLLA* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1318 213 CDD USP_Like 57 184 - -
Vra6g1318 213 Pfam Universal stress protein family 56 184 IPR006016 -
Vra6g1318 213 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 56 167 - -
Vra6g1318 213 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 213 - -
Vra6g1318 213 Gene3D HUPs 55 193 IPR014729 -
Vra6g1318 213 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1318 Vra-Chr6 25437246 25439403 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1318 - - gmx:100816511 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1318 6 25437246 25439403 Vra6g1318 6 25437246 25439403 ECH