Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1314 ATGAGTCCCTACATTTTCGGAGTCATACTCCCTCTCCTCGTCACGCTTCTCGTACGCAACAAGAATCCTCCCAGAAAACGTGGCGTTCCGGTCCAAACCGGCGGCGAGGCCGGTCTGGCTATCCGAAACAGCCGGTTTGAGTCCCCGGTCCAGAGCGCGTGGGAAGGCGTTGCCACGCTCGCAGAGCTCTTCGAAGAGGCGTGCAAAACGCATGCCGAGAGGCTCCTCCTTGGCACGCGCGTGGTGCTGGCGAGGGAAGTGGAGAGCGGCCCCGACGGCAGGTCGTTCGAGAAGCTTCACTTGGGAGACTACGGCTGGCTCTCCTACGATACGGTTTTCGATATCGTTTCGAGCTTCGCTTCCGGGTTAGCCTTCCTTGGACATGCCAGGGAGGAACGCGCCGCCATCTTTGCTGACACGCGCCAAGAGTGGTTTATGGCTCTTCAGGGTTGTTTCAGGCGAAATTTGACAGTGGTTACTATGTATGCATCATTGGGAGAGGAAGCTTTATCATATTCATTGAATGAGACAGAGGTTACAACAGTAATTTGTGGGCGAAAAGAAATGAAAACACTAGTAAATATAAGTGGACAACTTGACACAGTGAAACGTGTGATTTGCATGGATGATGATATCCCATCTGATGCCTCTTCTATTGCGTATAACTGGACAATCACTTCGTTCTCTGAGGTTCAGAGACTTGGCAGAGAAAACCCTGTTGAAGCTGATTTACCACTTTCAGCAGATGTTGCAGTTATAATGTATACAAGTGGAAGTACAGGATTACCCAAGGGTGTGATGATGACACATGGCAATGTCTTAGCTACACTCTCAGCTGTGATGACCATTGTTCCAGATATTGGGACCAAGGATATATATCTTGCATACTTGCCGATGGCTCATATCTTAGAATTAGCAGCTGAGAACTTGATGGCAGCTGTTGGAGTTCCTATAGGATATGGATCTCCTTTGACCCTTACTGACACGTCAAACAAGATTAAGAAAGGAACAAAGGGGGATGCTACTGCACTGAGTCCAACTCTAATGGCAGCTGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTGTTCAAGAAGGTAAATGCAACAGGAGGGTTGCCAAAGAAATTGTTTTATTTAGCCTATGCCCGGAGGTTGCAAGCAGTTAATGGTAGTTGGCTTGGAGCTTGGGGTTTGGAAAAGGCTCTTTGGGATTTTCTTGTGTTCAAAAAGGTCCGAGCTATTCTGGGCGGCCGTATCCGTTTTATACTATCTGGTGGTGCTCCCCTTTCTGGTGATACCCAGAAGTTCATCAACATTTGTCTCGGTGCTCCAATCGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCTGATGTTGATGACACTTCTGTTGGTCGTGTTGGACCACCTCTTCCATGCTCATTTATTAAGGTTGATGAAAGAGGCATGAGGTGGTTTTACACTGGTGACATTGGCAGATTTCATCCAGATGGATGCCTTGAAATCATTGACCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAATATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTATTGTTAGTCCCTTTGTGGACAATATTATGGTCCATGCTGACCCTTTCCACAGTTACTGTGTGGCACTTGTGGTGGGTTCTCAGTTCACATTGGAGGAATGGGCTTCACAAAAAGGAATTTCATATATCAATTTTTTAGATCTGTGTGCAAAAGAAGAAACTGTGAAGGAGGTGCACGCATCACTTGTAAAGGAGGGAAAGAAGGCTCATCTGGAGAAATTTGAGATTCCTGCAAAAATTAAACTGCTTTCTGATCCATGGACCCCTGAGTCTGGCCTTGTCACTGCTGCTCTCAAACTCAAGAGGGAGGCAATAAAAAAGACTTTTAATGAGGAACTGACAAAGTTGTATGCTTCATAG 1956 0.4673 MSPYIFGVILPLLVTLLVRNKNPPRKRGVPVQTGGEAGLAIRNSRFESPVQSAWEGVATLAELFEEACKTHAERLLLGTRVVLAREVESGPDGRSFEKLHLGDYGWLSYDTVFDIVSSFASGLAFLGHAREERAAIFADTRQEWFMALQGCFRRNLTVVTMYASLGEEALSYSLNETEVTTVICGRKEMKTLVNISGQLDTVKRVICMDDDIPSDASSIAYNWTITSFSEVQRLGRENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPDIGTKDIYLAYLPMAHILELAAENLMAAVGVPIGYGSPLTLTDTSNKIKKGTKGDATALSPTLMAAVPAILDRVRDGVFKKVNATGGLPKKLFYLAYARRLQAVNGSWLGAWGLEKALWDFLVFKKVRAILGGRIRFILSGGAPLSGDTQKFINICLGAPIGQGYGLTETCAGGTFSDVDDTSVGRVGPPLPCSFIKVDERGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPFVDNIMVHADPFHSYCVALVVGSQFTLEEWASQKGISYINFLDLCAKEETVKEVHASLVKEGKKAHLEKFEIPAKIKLLSDPWTPESGLVTAALKLKREAIKKTFNEELTKLYAS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1314 651 ProSitePatterns Putative AMP-binding domain signature. 253 264 IPR020845 -
Vra6g1314 651 SUPERFAMILY Acetyl-CoA synthetase-like 57 649 - -
Vra6g1314 651 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 483 - -
Vra6g1314 651 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 482 650 - -
Vra6g1314 651 Pfam AMP-binding enzyme 488 518 IPR000873 -
Vra6g1314 651 Pfam AMP-binding enzyme 101 485 IPR000873 -
Vra6g1314 651 Gene3D - 49 510 IPR042099 -
Vra6g1314 651 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 11 483 - -
Vra6g1314 651 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 482 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1314 Vra-Chr6 25324905 25337074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1314 148 650 Acyl Lipid Metabolism Gene Families AT1G77590 72.761 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1314 K01897 - gmx:100803677 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1314 6 25324905 25337074 Vra6g1314 6 25324905 25337074 ECH