Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1311 ATGGAGTTTTCTACCCTTAACAAGCTATTTTTCAACCCTCTTGTCTCTGCACTTGCACTTTTGTCCATTGCTACAACTTCACTCAACCCTGCAGTGGCCTCAAAACGCTGTGATTTCCCGGCCATCTTTAACTTTGGTGCCTCAAACGCTGACACTGGTGGCTTGGCTGCTTCCTTCCCTTTTGCTGGACCAAAACCACCCAGTGGAGACACCTTTTTTCGCAGACCTGCCGGAAGATTCTGTGATGGACGACTCATCATTGATTTCATGGCACAAAGATTTGGACTCCCTTATCTCAGTCCATATCTTGATTCAATGGGGTCCAACTTCTCACATGGAGCGAATTTTGCAACAGCAGGATCAACAATCATATTCCAACAAGCTGGAGGGCAGTATAGAAGCAGTCCTTTCAGCCTTGGAATTCAGTACCAGCAATTCGAACGTTTTAAACCTACTACGAAGTTGATTAGGGACCAAGGTGGGGTGTTTGCAGCACTGATGCCCAAAGAAGAATACTTTGATGAAGCTTTGTACACATTTGATATAGGTCAAAATGATCTTACAGTTGGCTTTTTTGGTAACACGACTCTTCAACAAGTTAATGCGTCTATACCTGATATAATATCGAACTTCACATCAAATATAAAGAACATATACAATTTGGGGGCTAGGTCATTTTGGATTCACAACACTGGACCTATTGGTTGTCTTCCTTTGATTTTGACCAATTTTGAATCTGCTGAAAGGGATAAGTATGGTTGTGCAAAGGCATACAATGAAGTGGCTAATTCTTTTAACCTAAAATTGAAGGAAGCCTTGGCTTATCTTCGTAAGGACCTTCCTACGGCTGCAATTACATATGTAGATATCTACTCTGCTAAGTACTCTCTTTTCAGAGACCCAAAGAAATATGGATTTGAGCTTCCACTTGTTGCTTGTTGTGGCTATGGAGGGAAGTACAACTTCAGCAATAGTGTTGGATGTGGAGGAACCATTAAGGTCAAGGACAATGATATTTTTGTAGGTTCTTGTGAAAGACCATCTGTTAGAGTGATATGGGATGGGATCCACTACACTGAAGCAGCTAACAAAGTTGTCTTCGATCAAATCTCTTCTGGGGCTTTCACAGATCCACCCATTCCATTGAATATGGCATGTCACAGAAAATAG 1170 0.4179 MEFSTLNKLFFNPLVSALALLSIATTSLNPAVASKRCDFPAIFNFGASNADTGGLAASFPFAGPKPPSGDTFFRRPAGRFCDGRLIIDFMAQRFGLPYLSPYLDSMGSNFSHGANFATAGSTIIFQQAGGQYRSSPFSLGIQYQQFERFKPTTKLIRDQGGVFAALMPKEEYFDEALYTFDIGQNDLTVGFFGNTTLQQVNASIPDIISNFTSNIKNIYNLGARSFWIHNTGPIGCLPLILTNFESAERDKYGCAKAYNEVANSFNLKLKEALAYLRKDLPTAAITYVDIYSAKYSLFRDPKKYGFELPLVACCGYGGKYNFSNSVGCGGTIKVKDNDIFVGSCERPSVRVIWDGIHYTEAANKVVFDQISSGAFTDPPIPLNMACHRK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1311 389 CDD SGNH_plant_lipase_like 40 373 IPR035669 -
Vra6g1311 389 Gene3D SGNH hydrolase 29 374 IPR036514 -
Vra6g1311 389 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 388 - -
Vra6g1311 389 Pfam GDSL-like Lipase/Acylhydrolase 42 370 IPR001087 GO:0016788
Vra6g1311 389 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 13 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1311 Vra-Chr6 25174007 25176517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1311 11 384 Acyl Lipid Metabolism Gene Families AT4G10950 26.562 6.71e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1311 - - gsj:114381660 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1311 6 25174007 25176517 Vra6g1311 6 25174007 25176517 ECH