Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1304 ATGAAAATGAAGCCTGCTAAGGTCACGATTGATCTGGATGATTATGAGAGTCGTGATAATCAGATAGTTCCTGATTCTGGAGATTTTAGGTTAGAAAGACGATGGAAAAGATGGGAACTTTCAAATACACGTGAAAAGCACAATCACCATGATGGTAGTACAAGATCAACCATAAATAATTGTGGAAATGTGTCGATTTTGTCACTACAAGAGGGTCATATGTCAGAGGATGAACTGGATGAAGATTACAAATTGTTTTTGCTTACATATAATTATGAAGATATTGATGTTGACAGTGACGATGACGCTGATGATTCTGATAATGACATTAATATTGGCTACAACAACATCCATTATGATAGTCAGTATATGATGTTTCTGGAGGAAGAAAGGTTTCATAACTATCCCAAGTTAAACACTTGGATGATGAAGGGTTCAAAACAAAGGTATGAAACAAGAAAAAATGGAAATAAAGGATGTAATTCAGTGAGAAAAGAGTTAAGTGACCCAATAAAATCTCAGCTGAATTTGGAGGCTAAAAGAAGACTTAGTAAGAAAAGGCCACGTGAAGATGTTTCTGTTGTGACTGGGAACCATTGCTACACTGAGATGAAGGGTTCAAAACAAAGCTATGAGACTGGAAATCAAGCATATAAAGGGAGTGATTCAGTGCCAAAACAAACAAGTCGCTCATTGAAATCTTGTCAGAATTTGGAGGCTAAAAGAGGACATAGCAAGAAACGACCACATGAAGATGTTTGCGGCGTGCACCAAAACAGTTGTCACAATGAGATGATGAAGGGTCGAAAACAAAGTTGTGAGTCTGGAAATAAAGGGAGTGATTCAGTGAGAAAACAGACAAGGGTCACAAGGAAATCGCAGCAGAATTTGGAGGCTAGAAGAGGACTTAGTAAGAAAAGGTCATACGAAGATGTTTCAGTCGTGCCCGAGAACAATTGTTACAGTAATACGGAACTAGATGTTGTGGATGATGATTACCAGACATTCCTGAATTCTCTTGTTGAGGACTATGTGCCTAGTGAATTATTAAGAAAGAGTTCAAGTGTCATGGGAAATTCACAAGTTTCTGATCATGTGCTGAGTGAAGCCGATGAAGATTACCTACGATATCTGAATTCTCTTAGTATTGATGATGAGGTGGAGTGTATGCCTGAAAGGAATACCTCAAAGACAGACATGCCTAAGAGGAAATCCACAAAGACAGACATGCCTGAGAAGAACACCTTAATGACAGACATGCCTAAGAGGAATACCACAAAGACAGACATGCCTGAGAAGAACACCTTAAAGACAGACATGCCTCAGAGGAATACCATAAAGACAGACATGCCTAAGAGGAATACCACAAAGACAGACATGCCTCGAAAGAACACCTTAAAGACAGACATGCCTCAGAAGAATACCTTAGAGACAGACATGCCTAAGTGGAATACCACAGAGACCTCAAAGACAGACATGCCTACGAGGAATACCACAAAGATATATATGCCTGAGAAGAACACCTCAAAGAGAGACATGCCTAAGAGGAAAACCTTAGAGACAGGCATGCCTAAGTGGAATACTACAAAGACAGACATGGGTGTGAGGAAAACCTTAGAGTCAGGCATGCTGGACAGGAATACCTTCAAAACAGACATGCCTGAGAGAAATGCCTTACATGCACACATACCTGAGAGGAATATCTCAAACACAGTTAATGTGCATGCTGACAGCAATTCCTCTGAACCCGATGTTATCCTTCTAGAACCTGATCAAATTCAGGAGAACACTCCATTTGTTTCTTCGAATACATATAATTCGTCTTGGTTTGGAACTGAAGTGAACCTCAAACACATGCCTGAGAGGAATATCCCAAATACAGTTAATGTGGATGGTGACAGCAATTCCTCTGAACCTGATGTTATCCTTCTAGAAACTGATCAAATTAAGGAGAACACTCCCTTTGTTTCTTCGGAAACATATGATTCGTCTTGGTTTGGATCTGAAGTGAACCTCAAACACATGCCTGAGAGGAATATCTCAAATACAGTTAATGTGGATGGTGACAGCAATTCCTCTGAACCTGATGTTATCCTTCTAGAACCTGATCAAATTCAAGAGAACACTCCATTTGTTTCTTCGAAAACATATGATTCGTCTTGGTTTGGAACTGGAGTTAACCTCAAAGACAACTGGCAATTATCTGCTTACCATCATTCTCAGTTTAGGAAAAGACTTATGAATGAACTTCAAAGGCCTTTTAACAAAGAAGAATATGATAGACTTTTTCTCGAAGTACGTCAGAAGAGGAAAACAGAGCGTCATATAGAAACACGTCAAGGGGTGGTCAAAGCTTATTGCACTCAGGGTGTCAACAAATCGTATCTTGAGTTGTATCCTGATCTAGCTAAAGCAATGGGTAAATTCAAAAAACCAGAAACGGATTTATTTATCCTGCGCGGATTTATTTTCTGGTTGCAAAATTTGACCCACCAAGGAATATTTAAGCCCTGGAATGACATTAAATGCTTGGAAATTTTAAGTAAAATGTGA 2553 0.3921 MKMKPAKVTIDLDDYESRDNQIVPDSGDFRLERRWKRWELSNTREKHNHHDGSTRSTINNCGNVSILSLQEGHMSEDELDEDYKLFLLTYNYEDIDVDSDDDADDSDNDINIGYNNIHYDSQYMMFLEEERFHNYPKLNTWMMKGSKQRYETRKNGNKGCNSVRKELSDPIKSQLNLEAKRRLSKKRPREDVSVVTGNHCYTEMKGSKQSYETGNQAYKGSDSVPKQTSRSLKSCQNLEAKRGHSKKRPHEDVCGVHQNSCHNEMMKGRKQSCESGNKGSDSVRKQTRVTRKSQQNLEARRGLSKKRSYEDVSVVPENNCYSNTELDVVDDDYQTFLNSLVEDYVPSELLRKSSSVMGNSQVSDHVLSEADEDYLRYLNSLSIDDEVECMPERNTSKTDMPKRKSTKTDMPEKNTLMTDMPKRNTTKTDMPEKNTLKTDMPQRNTIKTDMPKRNTTKTDMPRKNTLKTDMPQKNTLETDMPKWNTTETSKTDMPTRNTTKIYMPEKNTSKRDMPKRKTLETGMPKWNTTKTDMGVRKTLESGMLDRNTFKTDMPERNALHAHIPERNISNTVNVHADSNSSEPDVILLEPDQIQENTPFVSSNTYNSSWFGTEVNLKHMPERNIPNTVNVDGDSNSSEPDVILLETDQIKENTPFVSSETYDSSWFGSEVNLKHMPERNISNTVNVDGDSNSSEPDVILLEPDQIQENTPFVSSKTYDSSWFGTGVNLKDNWQLSAYHHSQFRKRLMNELQRPFNKEEYDRLFLEVRQKRKTERHIETRQGVVKAYCTQGVNKSYLELYPDLAKAMGKFKKPETDLFILRGFIFWLQNLTHQGIFKPWNDIKCLEILSKM* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1304 850 MobiDBLite consensus disorder prediction 450 466 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 393 497 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 265 310 - -
Vra6g1304 850 Coils Coil 847 850 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 273 293 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 294 310 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 467 497 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 206 251 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 206 236 - -
Vra6g1304 850 PANTHER F14J8.16 PROTEIN 23 619 - -
Vra6g1304 850 PANTHER F14J8.16 PROTEIN 678 849 - -
Vra6g1304 850 PANTHER F14J8.16 PROTEIN 23 619 - -
Vra6g1304 850 PANTHER F14J8.16 PROTEIN 678 849 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 237 251 - -
Vra6g1304 850 MobiDBLite consensus disorder prediction 393 410 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1304 - - var:108338689 1516.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1304 6 24996531 25002508 Vra6g1304 6 24996531 25002508 ECH