Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1264 ATGGCCTCAATATCAGGCATTTGCTCATCCTCCCCAACTCTCAACCACCAAAACCACTCCACCCCAAAACGACGCCGCACCCCTCTCCCCTCATTCCCCTCCCGCCCCAAACTCTTCCCCCCTCGCTCCCTCGCGCATGAAGCTCCCGCGCAACTCTCTTCGATAACAAAACCGCACCACGGGGGACTTGAGAAGGACTCACGCACCCTATGGCGCCGCTACGTGGAGTGGCTTTACCAGCACAAGGAGCTAGGCCTCTACCTGGACGTCAGCCGGGTCGGGTTCACCGACGAGTTCGTCCGCGAAATGGAGCCCCGCTTCCAGGCGGCGCTCCGCGCCATGGAGGACCTCGAGAAGGGCGCCATCGCGAACCCGGACGAGGGACGAATGGTTGGCCACTACTGGCTCAGGGACTCCTCGCGGGCGCCCACCGCGTTCCTCAAAACGCAGATTGATAACACGCTCGACGCCATTTGCAGCTTCGCGAACGACGTCGTCAGCGGTAAGATTAAGCCGCCGTCGTCGCCGGAGGGGAGGTTTACTCAAATACTTTCGGTTGGGATCGGAGGCTCCGCACTTGGACCGCAGTTTGTGGCGGAGGCGCTGGCTCCGGATAATCCTCCACTCAAGATAAGATTTATTGACAACACGGATCCTGCTGGAATTGATCATCAAATTGCACAACTTGGGCCTGAGCTAGCTTCAACACTTGTACTAGTAATTTCGAAGAGTGGTGGTACCCCAGAGACTAGAAATGGCTTGTTAGAAGTGCAGAAAGCTTTTCGTGAAGCTGGATTGAATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAACACTGCAAGAATTGAGGGCTGGTTAGCTAGATTTCCTATGTTTGACTGGGTGGGAGGTAGAACATCAGAGATGTCTGCGGTTGGCTTGCTTCCAGCAGCCCTTCAGACCATTGACATCAGAGAAATGCTTGCTGGTGCGGCATTAATGGATGAGGCAAATAGAAGTACTGTGATAAGGAATAATCCTGCAGCTTTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCAAAAGATATGGTTATCCTTCCATATAAGGACAGCTTGTTATTATTTAGTAGATACTTGCAACAGTTGGTCATGGAATCTCTTGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAACCAAGGAATTAGTGTCTATGGAAATAAAGGAAGCACGGATCAGCATGCCTATATTCAGCAACTGAGGGAAGGTGTGCACAATTTTTTTGTGACATTCATTGAGGTGCTACGCGATAGACCACCTGGTCATGATTGGGAGCTTGAACCAGGTGTCACATGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCCCTGTATGCCAATAACCGTGAATCCCTCACAGTCACAGTGCAAGAAGTGAACCCCAGATCAGTTGGTGCCCTAATAGCCCTTTATGAACGGGCTGTTGGAATATATGCCTCGATTATTAACATAAATGCGTATCACCAACCTGGTGTGGAAGCTGGTAAGAAAGCCGCAGGAGAAGTATTAGCACTTCAGAAGCGGGTATTGGCAGTGCTAAATGAAGCTAGCTGCAAGGAACCTGTCGAACCATTAACACTTGAAGAAGTCGCTGACCGTTGCCATGCCCCAGAAGATATTGAAATGATTTACAAGATCATTGCTCATATGGCTGCCAACGACAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCACGGAGCATTAAGGTTTTTCTTGGGGAGTGTAATCTTGATGAACTGTACGCATGA 1830 0.5005 MASISGICSSSPTLNHQNHSTPKRRRTPLPSFPSRPKLFPPRSLAHEAPAQLSSITKPHHGGLEKDSRTLWRRYVEWLYQHKELGLYLDVSRVGFTDEFVREMEPRFQAALRAMEDLEKGAIANPDEGRMVGHYWLRDSSRAPTAFLKTQIDNTLDAICSFANDVVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVLVISKSGGTPETRNGLLEVQKAFREAGLNFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQTIDIREMLAGAALMDEANRSTVIRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESLTVTVQEVNPRSVGALIALYERAVGIYASIININAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVADRCHAPEDIEMIYKIIAHMAANDRALIAEGNCGSPRSIKVFLGECNLDELYA* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1264 609 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 32 538 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 Gene3D - 315 514 - -
Vra6g1264 609 CDD SIS_PGI_2 364 528 IPR035482 -
Vra6g1264 609 Hamap Glucose-6-phosphate isomerase [pgi]. 83 532 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 609 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 Pfam Phosphoglucose isomerase 113 439 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 Pfam Phosphoglucose isomerase 470 530 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 Gene3D - 169 314 - -
Vra6g1264 609 SUPERFAMILY SIS domain 66 532 IPR046348 GO:0097367|GO:1901135
Vra6g1264 609 MobiDBLite consensus disorder prediction 1 18 - -
Vra6g1264 609 CDD SIS_PGI_1 152 318 IPR035476 -
Vra6g1264 609 MobiDBLite consensus disorder prediction 1 41 - -
Vra6g1264 609 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 609 - -
Vra6g1264 609 ProSitePatterns Phosphoglucose isomerase signature 2. 505 522 IPR018189 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 PRINTS Glucose-6-phosphate isomerase signature 183 202 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 PRINTS Glucose-6-phosphate isomerase signature 295 313 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 PRINTS Glucose-6-phosphate isomerase signature 371 392 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 PRINTS Glucose-6-phosphate isomerase signature 473 491 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 PRINTS Glucose-6-phosphate isomerase signature 491 505 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vra6g1264 609 PRINTS Glucose-6-phosphate isomerase signature 505 518 IPR001672 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1264 Vra-Chr6 23315375 23321256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1264 K01810 - gmx:100809452 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1264 6 23315375 23321256 Vra6g1264 6 23315375 23321256 ECH