Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1257 ATGGACAAGAGAGAAGCTAACAAGAAAGAAACAACTGCGAAAGCAGAGATGTCGGGTAGCGGAAACCTTAACCGCGTGTTGGTGTCGGTTGATGGAAGCGAGGAGAGCATGAAGGCGCTGCGTTGGGCGCTCAACAACCTCAAGCTCCGATCTCCTACTTCCGACTCCATCGATGCTCCTTCTTTCATCATCTTCCACGTTCAATCTCCGCCCTCCATCGCCACTGGCCTCAATCCCGGTGCCATCCCTTTCGGTGGCCCCAGTGATATTGAAGTTCCCGCTTTCACGGCAGCCATTGAAGCACATCAAGAGCGCATCACCCGTGCCGTTCTCGATCACGCCCTCGGAATTTGCTCCCAATTCAACCTCGGCATGCAGAGTCAAGTCAGAACTCATGTGGTAGTTGGAGATCCAAAGGAGAAGATTTGTGAAGCTGTGCAGGATTTGCATGCTGATGTTCTTGTGATGGGATCTCGTGCATTTGGCCCAATTAAGAGGATGTTCCTGGGGAGTGTGAGCAATTACTGCGCCCACCATGCTCCATGTCCTGTCATTATTATCAAGGAAAACGACAGTGTCAATAAGATAAACTGA 594 0.5084 MDKREANKKETTAKAEMSGSGNLNRVLVSVDGSEESMKALRWALNNLKLRSPTSDSIDAPSFIIFHVQSPPSIATGLNPGAIPFGGPSDIEVPAFTAAIEAHQERITRAVLDHALGICSQFNLGMQSQVRTHVVVGDPKEKICEAVQDLHADVLVMGSRAFGPIKRMFLGSVSNYCAHHAPCPVIIIKENDSVNKIN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1257 197 Pfam Universal stress protein family 127 188 IPR006016 -
Vra6g1257 197 Gene3D HUPs 11 195 IPR014729 -
Vra6g1257 197 CDD USP_Like 25 187 - -
Vra6g1257 197 PANTHER OS02G0760500 PROTEIN 20 189 - -
Vra6g1257 197 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 20 189 - -
Vra6g1257 197 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 193 - -
Vra6g1257 197 PRINTS Universal stress protein signature 23 41 IPR006015 -
Vra6g1257 197 PRINTS Universal stress protein signature 148 160 IPR006015 -
Vra6g1257 197 PRINTS Universal stress protein signature 166 188 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1257 Vra-Chr6 23023387 23026910 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1257 - - gmx:100805479 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1257 6 23023387 23026910 Vra6g1257 6 23023387 23026910 ECH