Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1241 ATGCATTCTTGGATGGACTATTGCTTGAGAGAGCTAGAGGGGAAGCAAGCACATGACCCTTTATTTATAGAGAAAATGAAGAATTATTCATCACAAAGTAGTAGTTGTAGTAGAGAGAGATGTGTGTGGGTGCCAGGGCCAGTGATTGTGGGAGCAGGGCCTTCAGGGCTTGCAACAGCAGCATACCTGAAAGAGAAAGGAGTTCCAAGCCTAATCCTAGAGCGATACAATTGCATAGCATCTTTGTGGCAACTCAAAACCTATGACAGGCTTCACCTCCACTTGCCAAAGCAGTTTTGTGAACTCCCCTTGATGGGGTTCCCTTGTGACTTCCCAACATACCCAACAAAGCAACAGTTCATAGAGTACTTGGAGAGCTATGCTGAGAGGTTTGCCATTAGGCCACGGTTCAATGAGACCGTTAGGCATGCTGAATTTGATGCCACTCTTGGGTTTTGGAAGGTGAAGAGTTTTAACAAGGAGGTGGCAACAGAGTTTGTGTGCAGGTGGCTGATTGTGGCCACCGGGGAGAATGCAGAGGCAGTGGTGCCTCAGATTGAGGGAATGGGGGACTTTGGTGGGACCGTAAAGCACACAAGTCTCTACAAGAGTGGGGAAGAGTTTCGAGGGAAGAGAGTGTTGGTGGTTGGGTGTGGGAATTCTGGAATGGAAGTGTGCTTGGATCTTTGCAACCACAATGCTACTCCTTCTCTTGTGGTCAGAGATACAGTACATATCTTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTGCTCAAGTGGCTTCCAATTCGGTTTGTAGATCGGTTTCTTCTCATAGTGTCATGGTTCATGCTTGGTGACACTGCTCGGTTCGGATTGGACCGGCCAAAATTGGGTCCCCTTCAACTCAAAAACCTCTCCGGAAAGACACCAGTGCTTGATGTGGGTACCCTTGCCAAGATCAAAAGTGGACATATAAAGGTGCGACCAGGCATCAAGCGGTTAAAACGTTATACAGTTGAATTTCTTGATAGAAGGACAGAGAATTTTGATGCCATCATATTGGCAACTGGTTACAAAAGTAATGTGCCCTATTGGCTAAAGGAAGGGGATATGTTCTCCAAGAAAGATGGGTTTCCAACGAAGCCATTTCCAAATGGATGGAAAGGTGAGAATGGACTCTATGCAGTTGGTTTCACCAAACGTGGCCTTCTTGGTACATCAATGGATGCCAAGAGAATAGCTGAAGACATCCAAAGATGTTGGAAAGCAAAGCATAGCACCACTTTTTCCCTCTCATTTAATGTTCCACAATCAAATTCATGA 1323 0.4588 MHSWMDYCLRELEGKQAHDPLFIEKMKNYSSQSSSCSRERCVWVPGPVIVGAGPSGLATAAYLKEKGVPSLILERYNCIASLWQLKTYDRLHLHLPKQFCELPLMGFPCDFPTYPTKQQFIEYLESYAERFAIRPRFNETVRHAEFDATLGFWKVKSFNKEVATEFVCRWLIVATGENAEAVVPQIEGMGDFGGTVKHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHILPREMLGKSTFGLSMWLLKWLPIRFVDRFLLIVSWFMLGDTARFGLDRPKLGPLQLKNLSGKTPVLDVGTLAKIKSGHIKVRPGIKRLKRYTVEFLDRRTENFDAIILATGYKSNVPYWLKEGDMFSKKDGFPTKPFPNGWKGENGLYAVGFTKRGLLGTSMDAKRIAEDIQRCWKAKHSTTFSLSFNVPQSNS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1241 440 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 34 427 - -
Vra6g1241 440 SUPERFAMILY FAD/NAD(P)-binding domain 48 323 IPR036188 -
Vra6g1241 440 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 34 427 - -
Vra6g1241 440 Pfam Flavin-binding monooxygenase-like 49 365 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vra6g1241 440 PRINTS Pyridine nucleotide disulphide reductase class-II signature 46 68 - -
Vra6g1241 440 PRINTS Pyridine nucleotide disulphide reductase class-II signature 208 232 - -
Vra6g1241 440 Gene3D - 47 426 IPR036188 -
Vra6g1241 440 PRINTS FAD-dependent pyridine nucleotide reductase signature 47 66 - -
Vra6g1241 440 PRINTS FAD-dependent pyridine nucleotide reductase signature 168 186 - -
Vra6g1241 440 PRINTS FAD-dependent pyridine nucleotide reductase signature 212 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1241 Vra-Chr6 22339334 22343602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1241 K11816 - gmx:100804746 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1241 6 22339334 22343602 Vra6g1241 6 22339334 22343602 ECH