Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1240 ATGCTCAAGTTGTGGAAATGGTACCAGAATTGCTTGGCGGTTCACCCTGTTAAGACGCAGGTCATCAGCTCTGGCTTGATTTGGGGTGCTGGTGACATAGCTGCTCAGGCAGTTACGCACTATACTGCCAAGGCCCATGCCACAATGGATGAGGATGACAATAAAGAGTTAAAGATCAACTGGAAACGGGTGTCTACAACCAGCTTGTTTGGGTTAGGATTTGTCGGTCCTGTTGGCCACTACTGCACTTTGTTGTGGTATGACCTCCTCCTCAGCTTAGGCGGCTTTGATCTTAAGGGGGACCATTCCCAAGTCTTACAAAAGGCTACCTCAATCATATTTATAGCTGATGGGGAACATCCAATACTGTTTGATAGTGTTCCTCAAATAAAAGAAGATGTTAAGAGAGATTTCCTCCCAGCCTTTGTTTTAGAAGGGGGCATATGGCCAATTGTTCAGGTTGCAAATTTTCGGTTTATACCTGTGAGGTATCAACTCCTTTATGTCAACTTCTTCTGTTTATTGGATAGCTGTTTCTTGTCTTGGGTTGAGCAACAGCAGGATGCACCTTGGAAACAGTGGTTGAAATCACTTCTACCTTTGAAGTAA 609 0.4433 MLKLWKWYQNCLAVHPVKTQVISSGLIWGAGDIAAQAVTHYTAKAHATMDEDDNKELKINWKRVSTTSLFGLGFVGPVGHYCTLLWYDLLLSLGGFDLKGDHSQVLQKATSIIFIADGEHPILFDSVPQIKEDVKRDFLPAFVLEGGIWPIVQVANFRFIPVRYQLLYVNFFCLLDSCFLSWVEQQQDAPWKQWLKSLLPLK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1240 202 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 90 IPR007248 GO:0016021
Vra6g1240 202 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 126 201 IPR007248 GO:0016021
Vra6g1240 202 Pfam Mpv17 / PMP22 family 126 181 IPR007248 GO:0016021
Vra6g1240 202 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 1 90 - -
Vra6g1240 202 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 126 201 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1240 7 187 Miscellaneous Gene Families AT2G14860 23.834 2.58e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1240 K13348 - gmx:100805283 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1240 6 22306169 22309658 Vra6g1240 6 22306169 22309658 ECH