Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1239 ATGGCCCAACTTAGTGTCCCGGTAAAATCACTAACAACCTCATGCAAATTTTCTCATATTCACATCCCCAAATCTGCTTTCTTTTCTCACTGTCTCCCTCCATTTCCCTCTTTCACCACCAAACCTTCTCTCTTTGTCCAACCTAGTTACCCGTTATCGGCGCTTCGTTACCGCACTCTCACACCATGCAACTGTAATAAGTCAGATATTATTTCGCAATTGGAACTCGGAAAACCTGAGCCAAAAGGGAAACCGGAGAAACGAGTTAACGGCATATTCTGGATCATTCTCCTCAACATTGGCGTTTTCATTGCTGACCACTTTTTTCATGTTAATGGGGCAAAGGATTTGTACTTGTACCACACGTGGCCTGCTTGGTACCAGTTTGTCACAGCTACATTTTGTCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCCTGTACATTTTTGGAAAACTTGTTGAAGAAGAGGAAGGGAACCTTGCTTTGTGGCTTTCTTATATTCTTACTGGTGTAGGAGCAAACCTTGTTTCATGGTTGGTTTTACCTAGAAATACAGTTTCTGTTGGAGCTTCTGGTGCTGTTTTTGGGTTATTTACCATCAGTGTCCTTGTAAAGATGTCCTGGGACTGGAGGAAGATCCTTGAAGTGCTTATATTGGGTCAGTTCGTTATAGAGAAGGTTATGGAGGCAGCCCAAGCTTCAACATCATTATCAGGAACCTTTCACGGAGGCTACACATTGCAAAGTGTAAATCACATCGCACATCTTTCTGGTGCGCTTGTTGGTGTGCTTTTGGTTTGGCTTCTTAGCAAAGTGCCTTCTGCTCCTTTAGACCAATAA 849 0.4276 MAQLSVPVKSLTTSCKFSHIHIPKSAFFSHCLPPFPSFTTKPSLFVQPSYPLSALRYRTLTPCNCNKSDIISQLELGKPEPKGKPEKRVNGIFWIILLNIGVFIADHFFHVNGAKDLYLYHTWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNLALWLSYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGTFHGGYTLQSVNHIAHLSGALVGVLLVWLLSKVPSAPLDQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1239 282 SUPERFAMILY Rhomboid-like 90 276 IPR035952 -
Vra6g1239 282 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 37 280 - -
Vra6g1239 282 Gene3D - 86 277 IPR035952 -
Vra6g1239 282 Pfam Rhomboid family 126 274 IPR022764 GO:0004252|GO:0016021
Vra6g1239 282 PANTHER RHOMBOID-RELATED PROTEIN 37 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1239 Vra-Chr6 22291649 22295045 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1239 - - gmx:100781449 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1239 6 22291649 22295045 Vra6g1239 6 22291649 22295045 ECH