Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1182 ATGTGGAGAGAGAGTGCGTTCTTGGTGATTCTGCTGTTTCGACTTCACCAAATTTCTGCTACAAAGCACTATGTTCATGCTTGTCCCCTTTCTTCCTGTGGCAAACTCACCAACATAACGCATCCATTCCGACTAAAAGGCGACCCAGATCGCTGCGGCGACCACAGGTATGAGCTCACCTGTGAAAATAACGTTACAATTTTATCTTTGTACTCCGGAAAATACAATGTGCAGGCCATCAACTACAATAATTTCACAATCCGAGTGGTTGATCCCGGTGTTCGGCAATCAAATTGCTCCTCCATTCCTCTCTATTTCTTGTCTCGATCCAATTTCAGTGATTCCTATAATTTCCTCGAGATTGATATGGATGCATACCAAACTACTCAAGAACGATTATCCGAACCTATCTATTTTAACCATATAAGAATGCGCGAAGTTCTTTCAAAGCCGGTTTCCGAACATGTAGTTTTCATGAATTGTAACCATACTGTGAGTGACAATGGTAAGTATGTAGATACTGCTCCCTGCGTGAATTGGCACTCCAAAGGTTATACATATGCTATAGCTGGGGACCTAATAGCCGAGGAGTTAGAAGTTGGTTGTAATGTAAAGCTGGTTACTCCCACATCTTGGTGGGGTTTGAACACACCTCAATATTCCTACAGTGAGATGCACAAGGCACTAGCGTATGGGTTTGAGATTTCGTGGATGAATCGCGCCTGCCAGGACATTTGTGCAAATTCAATGGATAGTTCAATGGATGGCTCCTGCATATGGGACACTTCCGGGAGGCTTGATTGCTCGCTCAACTGCCACAGCTGGTTTACTCCCAAGCAACCTAATTTCTGA 852 0.439 MWRESAFLVILLFRLHQISATKHYVHACPLSSCGKLTNITHPFRLKGDPDRCGDHRYELTCENNVTILSLYSGKYNVQAINYNNFTIRVVDPGVRQSNCSSIPLYFLSRSNFSDSYNFLEIDMDAYQTTQERLSEPIYFNHIRMREVLSKPVSEHVVFMNCNHTVSDNGKYVDTAPCVNWHSKGYTYAIAGDLIAEELEVGCNVKLVTPTSWWGLNTPQYSYSEMHKALAYGFEISWMNRACQDICANSMDSSMDGSCIWDTSGRLDCSLNCHSWFTPKQPNF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1182 283 Pfam Wall-associated receptor kinase galacturonan-binding 28 91 IPR025287 GO:0030247
Vra6g1182 283 PANTHER OS01G0113900 PROTEIN 7 245 - -
Vra6g1182 283 PANTHER OS01G0690200 PROTEIN 7 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1182 Vra-Chr6 20190857 20194798 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1182 - - vra:106763552 582.408