Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1154 ATGGGTTTGACGGGGATTTTTTGTTTTTCCATATTTCTTTTTATTCCAGTTGAATCTACTGGAAGAGAAGGGAATATGTGGCTCCAAAACTTGGGTGCGGAGTCCAGAGGAACTGTGAGTTTGACCGTCTTCAGTGCAAGTATATTTGTTGTTGCTGCTCTTGTTCTCTCCATGTATTTAGTATTTGAGCATTTAGCCTCCTATAATCAGCCGGAGGAACAAAAGTTTTTGATTGGTATCATTTTAATGGTTCCTGTTTATGCATTGGAATCATTTTTGTCAGTTTTGGATTCTGATGCAGCATTTAACAGTGAAATTATCCGGGAATGCTATGAAGCTTTTGCATTATACTGCTTTGAGAGATATTTGATAGCTTGCTTAGGTGGTGAGGACAAAACTATTCAATTTATGGAAAGTATGAACTTAACAGACTCCAGTATTCCTCTTCTGAAAGAAGCATATGCTTATGGAGTTGTAGAGCATCCATTTCCCTTAAATCTCTTCCTGAAGGATTGGAATCTAGGCTCCGAGTTCTATCAATCTGTGAAAATTGGCATTGTACAATATATGATACTGAAGATGATATGTGCAGTACTGGCAACAATTCTCCAATCTTTTGGGGTTTATGGAGAGGGGAAGTTTGAATGGAAATATGGATGGGCGTGGCTGCTGTTGTGCACCTTTATGTCTTCCCAGCAGAACCTTACAAAAGGGGGGAGAGGTGTGTCCGTAATGTAGCAGTGATGACCGACTATGCCTCGCTAGGAGTGCCACCAGATCCTGAGGAGGTTCGAGACTGTCAGCGCTCGACGAGAACATGGCTGGGAGCCTATGAGAGAGAAAAACCTATGAAATTTACCCAGAGTGTTCGGGACGTTGTTGTTGGAAGTGGTGAAATTATTGTCGATGACATGATGTTTACAGTTTCTCATGTGGTGGAGCCTGTTGAGAGGGGCATTGCAAAGATAAACAAAACCTTTCATCAAATATCAGAAAATGTGAAACGCCATGAGCAGAGGACGCAAATCGCCAAGGATGATTGTTACCTTGTTCCCTTGCGATCACGAATACCAGAATTTTCTGACGTTCATGATAGTATGGGTGATGGAAGTTTCAGTGATAGTGGCTTATCCAGTGGAAAACGACAGTATTCTCAGTCAAAAGCAGGAACCTCCAGAAGTAGAAGATAG 1190 0.416 MGLTGIFCFSIFLFIPVESTGREGNMWLQNLGAESRGTVSLTVFSASIFVVAALVLSMYLVFEHLASYNQPEEQKFLIGIILMVPVYALESFLSVLDSDAAFNSEIIRECYEAFALYCFERYLIACLGGEDKTIQFMESMNLTDSSIPLLKEAYAYGVVEHPFPLNLFLKDWNLGSEFYQSVKIGIVQYMILKMICAVLATILQSFGVYGEGKFEWKYGWAWLLLCTFMSSQQNLTKGGRGVSVM*Q**PTMPR*ECHQILRRFETVSARREHGWEPMREKNL*NLPRVFGTLLLEVVKLLSMT*CLQFLMWWSLLRGALQR*TKPFIKYQKM*NAMSRGRKSPRMIVTLFPCDHEYQNFLTFMIVWVMEVSVIVAYPVENDSILSQKQEPPEVED 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1154 388 Pfam Organic solute transporter Ostalpha 44 323 IPR005178 -
Vra6g1154 388 PANTHER PROTEIN LAZ1 HOMOLOG 1 19 231 - -
Vra6g1154 388 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 19 231 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1154 Vra-Chr6 18697469 18713601 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1154 - - gmx:100819153 398.667