Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1141 ATGATACCTAACAAACCAAAAAACTGTCCGTCGACTCCATCACCACCATCTTCAATCTTCAAGATGGCTGGTGGCCACCGGCTTTGTTTTCAGATTTTGGGATTCATTCACGCACTTCAATTTTTGTGTTCAATCACAACCGTCTACGGCATGGTCCCACAGTCCCCGGTTGAATGCAGCAGTTCAGGGTGCATTCTCCGCAACTCCTACGGTGCGTGGGGTGACCGCAGGGACTGTTCTGCCCTCAACGTGACATACCCAACCACAGAAGAACAGCTTCGTTCGGCAGTGTCCTACGCTGTCCGAAACAACCTCAAAGTCAAGGTGGTCACGAAATTTTCGCACACCATTCCCAAGTTAGCATGTCCCCAAGGGAGTTCCAGAGCAAGTGCAGGTGCCACTATCCTCATCAGCACAGAGAAATACGACTCTGGCATCGAAATCGATGCTGCGAATATGGCAGTGACTGCGGACGCCGGTGTGGGGCTTCGGCAACTGATTGACGTGGTTGAGAGTAGAGGGTTCAGCTTGGTGGCTGCGCCTTATTGGGAGGGGGTGACGGTTGCCGGAGTTATTAGCACGGGGGCACACGGTAGTTCGTGGTGGGGTAAAGGTGGTTCTGTTCATGATCATGTTCTGGCTATTACTCTTGTAGTCCCTGCTTCCAGATCTGAAGGGTATGCAAAGGTTTTGAGGTTGGAGGCGCAGGACCCCATGCTTAATGCGGCCAAGCTGTCTCTGGGAGTGCTTGGTGCCATCTCTAAGGTAAAATTATCCATCGAGCATAGGTTCAAAAGAAGCATAAGATACAATTTCTCAGAAAAAGATGATGTGATCGAAGATGTATACGCAGAGCATGCGAAAAAGTATGAATTTGCAGATATAACTTGGTATCCATCAAGGCACACAGTGGTGTACAGATATGATTCTAGGGTTCCCTTAAATGCCTCCGGTGATGGACTTAATGACTTCATTGGATTTCAACCCAATTCCATCGTGATATCAGAATCAGTTAGAGCAGCAGAAAAACTACTAGAGAGTACGAGAAACGTGAATGGGAAATGCTTAACAGCAGCTACAACTTTGGGCTTCAAGAGATTAGTAGGAAATGGGTTGAAGAACAATGGCCAAATCTTCAGTGGCTACCCTGTAGTGGGTTACCAAGGCAAAATGCAAACTTCAGGTTCATGCTTATATTCAACAAGATTTGACACATCATGTGCTTGGGATCCACGAATCAAAGGGCTATTTTTCTATGAGAGCACTGCAATCTTCCCTTCATCAGCATTTGGAGACTTCGTCCGTGACGTGAGAAAACTGAGAGACCTAAAACCAGAAAATTTCTGTGGGGTGGACAACTATAACGGGTTGCTAATTCGCTTCATCAAAGCCTCAAGTGCATATCTAGGGCAACCTGAGGACTCAGTAGTGGTTGATTTCAACTATTATCGGGCAAACGACCCTTCAAATCCTAGACTAAACCAAGATCTGTTGGAGGAAGTGGAGCAATTGGCATTCTTCAAGTATGGGGCTAAGCCACATTGGGCTAAGAATAGGAATGTAGCATTCCTAGGGGTGCAGCATAAGTATCCGAAGTTTGACATGTTCATTGCAGCAAAACAAAAAATGGATCCTCAAAATGTGTTCTCCAGTGAATGGTCTGATGCTATACTTTATGGGAAGGAATCAGAAAAAGTTGATGGGTGTGCGTTGGAGGGACTCTGCATATGTAGCGAAGACAGACATTGCAGCCCCCAAAAAGGGTTTTACTGCAGCCATGGCCTTGTCTACATGGAAGCTAGAGTTTGTAGATATTCACAATCATCAATGTCACCGTCATCAACCATAGCATGA 1854 0.4628 MIPNKPKNCPSTPSPPSSIFKMAGGHRLCFQILGFIHALQFLCSITTVYGMVPQSPVECSSSGCILRNSYGAWGDRRDCSALNVTYPTTEEQLRSAVSYAVRNNLKVKVVTKFSHTIPKLACPQGSSRASAGATILISTEKYDSGIEIDAANMAVTADAGVGLRQLIDVVESRGFSLVAAPYWEGVTVAGVISTGAHGSSWWGKGGSVHDHVLAITLVVPASRSEGYAKVLRLEAQDPMLNAAKLSLGVLGAISKVKLSIEHRFKRSIRYNFSEKDDVIEDVYAEHAKKYEFADITWYPSRHTVVYRYDSRVPLNASGDGLNDFIGFQPNSIVISESVRAAEKLLESTRNVNGKCLTAATTLGFKRLVGNGLKNNGQIFSGYPVVGYQGKMQTSGSCLYSTRFDTSCAWDPRIKGLFFYESTAIFPSSAFGDFVRDVRKLRDLKPENFCGVDNYNGLLIRFIKASSAYLGQPEDSVVVDFNYYRANDPSNPRLNQDLLEEVEQLAFFKYGAKPHWAKNRNVAFLGVQHKYPKFDMFIAAKQKMDPQNVFSSEWSDAILYGKESEKVDGCALEGLCICSEDRHCSPQKGFYCSHGLVYMEARVCRYSQSSMSPSSTIA* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1141 617 Pfam D-arabinono-1,4-lactone oxidase 460 555 IPR007173 GO:0003885|GO:0016020
Vra6g1141 617 Gene3D - 144 261 IPR016169 -
Vra6g1141 617 Gene3D - 420 520 - -
Vra6g1141 617 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 53 604 IPR010030 -
Vra6g1141 617 PANTHER L-GULONOLACTONE OXIDASE 3 53 606 - -
Vra6g1141 617 Pfam FAD binding domain 84 220 IPR006094 GO:0050660
Vra6g1141 617 Gene3D - 65 142 IPR016167 -
Vra6g1141 617 SUPERFAMILY FAD-binding/transporter-associated domain-like 68 260 IPR036318 GO:0050660
Vra6g1141 617 ProSiteProfiles PCMH-type FAD-binding domain profile. 77 263 IPR016166 GO:0071949
Vra6g1141 617 PANTHER GULONOLACTONE OXIDASE 53 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1141 Vra-Chr6 18033443 18041369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1141 K00103 - gmx:100778616 1012.68