Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1137 ATGGAAAGTGATCCTGTGAAACTAAAAGTCCACCTAGTCACTGGCACGGACACAGCCGAGTTCAGGCTGCTGAGTGAGGCGTTGGGTCGGAGCTCAGTGGTGGGCCTGGATGCAGAGTGGAAGGCGGTACGGAGGTCGTTCCCAACGGTGTCGGTGCTTCAAATCGCGTGCGGCGACTGGGGCGTGTTTGTGTTGGACTTATTGTCCATTCCTCTCTCTTCACTGTCGGAACCGCTGCGAGAATTGCTGCTGTGCCCCGACATCTTGAAACTCGGATTCGGATTCAAGCAGGATTTGACTTACTTGTCCTCCACTTTTTGCTCCCACGGCGGTTTCGACAAGGTTGAGCCATATTTGGATATCAGGAGTGTGTACAATCATCTGCAGCATAGTAAGAAGCATGAACCCAAGCAAAGTAAGAGTTTGTCAACAATTTGTTCAGAAGTATTGGGGTTTTCGCTCTCCAAGGAACTTCAATGTAGTGATTGGTCACATCGTCCTCTTACAGAAGAGCAGATAAGATATGCAGCTATGGATGCTCATTGCTTGCTCGACATATTTAAGCTATTCCAGAAAAAGGTCGTCAAAGAAGGAGACTTGATTCTTGAGACCATAGTATTCTCTAATCGTGATGCAAGTCTTGGGTTAAAAGAGCTATTCAGAAGTCACGATACGAGTGATAAAGTCCTAAGAGCACATTTTTGTGAAGCTTTAGCAATTGTCAAGGCCACAACTTGTTCTGATGTTGCTCGTATCATACCTCTAGCTGGGGGAATCATCCAAAAGTCATCATATTGGGTTACTATGCCAATGGATGAAGTTTTGTTGAAAGTTGTAAAAAAATATGGTGATAGCATCTTGCTAAAGGAGTTAGACAAAAAACCCAAAAGCTCAAAAAAGAAAGGGAAGAAGCATTCACTACTTAATGGGACTAGGAAAGAAAATCATTTTGAGAAGTTTGATGAGTTGCAACGTACCCCACCATGGGATCCTTTGGAGGGAGGGAATGGATATCCAAAGTTCCTTTGTGATGTAATGGTTGAAGGCTTGGCAAAACATTTACGATGTGTTGGGATAGATGCTGCAATTCCTTATTCAAAGAAGCCTGAGCCAAGGATGTTGATAGAGCAAGCACAAAAAGAGAAACGAGTGATTTTGACACGGGATGCAAAGTTGCAAAGACATGATTATCTGATGAAAAACCAAATATATAGAGTGAAGAGTCTTTTGAAAAATGAACAGCTACTTGAGGTTATTGAATCTTTTCAACTTAAAATTAATGAGGACAAGCTAATGTCGAGGTGCACAAAATGCAATGGAACTTTTATTCAGAAGCCACTGACAACTGAAGAAGCTATTGAAGCTGCGAAGGGTTTTCAAAGAATTCCAAATTGCTTATTTGACAAGAATTTAGAGTTTTGGCAGTGCATGGACTGTCACCAACTTTATTGGGAGGGAACCCAATACCATAATGCAGTTCAGAAGTTCATTGACATTTGCAAGCTGAGTGACTAA 1515 0.4238 MESDPVKLKVHLVTGTDTAEFRLLSEALGRSSVVGLDAEWKAVRRSFPTVSVLQIACGDWGVFVLDLLSIPLSSLSEPLRELLLCPDILKLGFGFKQDLTYLSSTFCSHGGFDKVEPYLDIRSVYNHLQHSKKHEPKQSKSLSTICSEVLGFSLSKELQCSDWSHRPLTEEQIRYAAMDAHCLLDIFKLFQKKVVKEGDLILETIVFSNRDASLGLKELFRSHDTSDKVLRAHFCEALAIVKATTCSDVARIIPLAGGIIQKSSYWVTMPMDEVLLKVVKKYGDSILLKELDKKPKSSKKKGKKHSLLNGTRKENHFEKFDELQRTPPWDPLEGGNGYPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPEPRMLIEQAQKEKRVILTRDAKLQRHDYLMKNQIYRVKSLLKNEQLLEVIESFQLKINEDKLMSRCTKCNGTFIQKPLTTEEAIEAAKGFQRIPNCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDICKLSD* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1137 504 Pfam 3'-5' exonuclease 16 194 IPR002562 GO:0003676|GO:0006139|GO:0008408
Vra6g1137 504 Gene3D - 2 228 IPR036397 GO:0003676
Vra6g1137 504 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 8 501 - -
Vra6g1137 504 SMART 35exoneu6 12 195 IPR002562 GO:0003676|GO:0006139|GO:0008408
Vra6g1137 504 Pfam Mut7-C RNAse domain 339 495 IPR002782 -
Vra6g1137 504 SUPERFAMILY Ribonuclease H-like 16 198 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1137 Vra-Chr6 17947370 17982278 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1137 K09122 - gmx:100781231 835.099