Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1023 ATGGATAGTGCTGCAGGTCAAATTCTCTATCCTTTGCACCGTTGCAAAACTGTTCATCTGGTTAGACATGCTCAGGGAGTTCATAATGTTGCAGGAGAGAAGAACCATGATGAATACATGTCTTACGATTATTTTGATGCACACCTAACCCCTCTCGGTTGGAACCAGGTTGATAATCTGCGAAAACATGTGAAGGCAACAGGACTTTCGAAAACTGTCGAACTTGTTGTGGTTTCCCCATTGTTAAGGACCATGCAAACAGCAGTTGGAGTCTTTGGTGGTGAAGTATACACTGATGGGATTAGTGAACAACCTCTTATGATGGAAAATGTCGGACACAGTGATCATCTTGCAGTTTCTAGTCTGAACTGCCCTCCATTTATAGCGGTGGAGCTTTGCCGAGAGCAAATAGGAGTTCATCCTTGTGATAAGAGAAGAACCATCAGCGAGTACCGGAATATGTTTCCAGCAATTGATTTTTCACTTATTGAGAATGAGGAAGACATTTTGTGGAAACCCGACGTCAGAGAGAAGGTAGAAGCAGTTTCTGCTAGGGGCCTGAAGTTTTTGGAATGGTTGTGGACACGTAAAGAGAAGGAGATAGCAATTGTTACCCACAGCAGTTTTCTGTTTAATACCCTTCGTGCTTTTGGAAACGATTGTCATCCCAACATAAAGAGTGAAATACGAAAACACTTTACTAATTGTGAGCTGCGTTCAATGGTCATCATTGATAGAGGTATGATTGGATCAAGTGAATCAACAACTAACTTTCCTGGCAAGATTCCTCGTGGCCCTGATGTTCCCAGTGAAGCTGCAGACTAA 825 0.4267 MDSAAGQILYPLHRCKTVHLVRHAQGVHNVAGEKNHDEYMSYDYFDAHLTPLGWNQVDNLRKHVKATGLSKTVELVVVSPLLRTMQTAVGVFGGEVYTDGISEQPLMMENVGHSDHLAVSSLNCPPFIAVELCREQIGVHPCDKRRTISEYRNMFPAIDFSLIENEEDILWKPDVREKVEAVSARGLKFLEWLWTRKEKEIAIVTHSSFLFNTLRAFGNDCHPNIKSEIRKHFTNCELRSMVIIDRGMIGSSESTTNFPGKIPRGPDVPSEAAD* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1023 274 SMART PGAM_5 17 213 IPR013078 -
Vra6g1023 274 CDD HP_PGM_like 17 88 IPR013078 -
Vra6g1023 274 Pfam Histidine phosphatase superfamily (branch 1) 19 90 IPR013078 -
Vra6g1023 274 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 1 274 - -
Vra6g1023 274 MobiDBLite consensus disorder prediction 254 274 - -
Vra6g1023 274 SUPERFAMILY Phosphoglycerate mutase-like 16 246 IPR029033 -
Vra6g1023 274 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 1 274 - -
Vra6g1023 274 Gene3D - 12 259 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1023 Vra-Chr6 14297160 14306695 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1023 - - gmx:100817808 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1023 6 14297160 14306695 Vra6g1023 6 14297160 14306695 ECH