Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1004 ATGAAGGGAGAGACGGCGACGCTGTTGCTGGTGAACCTGGCGGGGATAATGGAGAGGGCGGATGAGTCACTGCTTCCGGGAGTATACAAGGAAGTGGGAGCTGCGCTTCACACCGACCCCACCGGCCTCGGTTCTCTCACTCTCTTTCGATCCATCGTTCAATCATCCTGCTACCCTATCGCCGCCTACCTCGCCGTCCGCCACAACCGCGCACATGTCATCGCCCTGGGCGCTTTTCTCTGGGCCGCCGCCACCTTCCTTGTTGCATTCTCCTCCACTTTCTTCCAGGTAGCTTTGTCACGAGCATTTAATGGAATTGGCCTTGCGCTTGTAGCACCTGCAATCCAGTCTCTTGTTGCTGACTCAACTGATGACAGCAATCGTGGCATGGCTTTTGGATGGCTTCAACTAACAGGCAATGTTGGTTCGATTATTGGTGGCCTCTTCTCAGTGTTGATAGCTCCAATAACTGTGTTTGGAATCCCTGGTTGGAGAATTTCCTTTCACATTGTTGGACTAATAAGCATTATAGTAGGTGTTTTAGTATACCTCTTTGCCAATGACCCACACTTCTCAGATAATGGTAGAAATGATAGGAGGCAAGCTCCAAATAAAACATTTTGGTCTGAAGTGAAAGATCTGGTTGAGGAGTCCAAGTCAGTTTTGAAGATTTCGTCTTTTCAGATTATTGTTGCACAGGGTGTCACTGGCTCCTTTCCCTGGTCTGCTTTATCATTCGCACCAATGTGGTTAGAGCTTACTGGCTTCACCCACAACAAAACTGCTTTCCTCATAGCTCTGTTTGTTGTTGCCAGTTCTATTGGGGGATTGTTTGGAGGTAAGATGGGAGATATTCTCTCCAAGCATCTTCCAAATTCTGGGAGAATAATTCTGGCTCAGATAAGCTCTGGATCAGCCATCCCCTTAGCAGCACTTCTTTTGCTTGGTTTGCCGGATGATCCCTCCTCAATAGCGTCTCATGCTTTGGTTCTAATAATTATGGGGCTCCTGATTTCTTGGAACGCTCCTGCTACAAATAATCCAATTTTTGCAGAGATAGTTCCAGAGAGATCCCGAACAAGTGTATACGCCTTGGACAGATCTTTTGAGTCTATATTATCATCTTTTGCTCCCCCTGCAGTGGGGATTTTGGCTCAACATGTTTATGGGTATAAGCCCCTTCCTGAAGGGTCTAGTGAATCTCAAGAGATTTCGACAGACAGAGAGAACGCAGCATCATTGGCTAAGTCTCTTTACACAGCCATAGGAATCCCAATGGCTCTCTGCTGCATAATCTACACATTTCTTTATAGAACATATCCAAGAGACAGGGAACGAGCTAAGATGAAAGCTTTAATAGAATCAGAGATGCAATTAATTGAATCAGGTGCTTTAGACATGGATAAAGAGTTTGAGTCAGAAGAATTATCTATTGCAGAGTTTGAGTATGATGGTGATGGCGATCTTGATGGAGAAGATAACACATTACTCTACCGGCAGTTGACATTTTCCAAAGAATAA 1521 0.4556 MKGETATLLLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQSSCYPIAAYLAVRHNRAHVIALGAFLWAAATFLVAFSSTFFQVALSRAFNGIGLALVAPAIQSLVADSTDDSNRGMAFGWLQLTGNVGSIIGGLFSVLIAPITVFGIPGWRISFHIVGLISIIVGVLVYLFANDPHFSDNGRNDRRQAPNKTFWSEVKDLVEESKSVLKISSFQIIVAQGVTGSFPWSALSFAPMWLELTGFTHNKTAFLIALFVVASSIGGLFGGKMGDILSKHLPNSGRIILAQISSGSAIPLAALLLLGLPDDPSSIASHALVLIIMGLLISWNAPATNNPIFAEIVPERSRTSVYALDRSFESILSSFAPPAVGILAQHVYGYKPLPEGSSESQEISTDRENAASLAKSLYTAIGIPMALCCIIYTFLYRTYPRDRERAKMKALIESEMQLIESGALDMDKEFESEELSIAEFEYDGDGDLDGEDNTLLYRQLTFSKE* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1004 506 PANTHER SPINSTER 1 471 IPR044770 -
Vra6g1004 506 Pfam Major Facilitator Superfamily 13 340 IPR011701 GO:0022857|GO:0055085
Vra6g1004 506 Gene3D MFS general substrate transporter like domains 226 450 IPR036259 -
Vra6g1004 506 Gene3D MFS general substrate transporter like domains 5 192 IPR036259 -
Vra6g1004 506 CDD MFS_spinster_like 8 433 IPR044770 -
Vra6g1004 506 PANTHER - 1 471 - -
Vra6g1004 506 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 444 IPR020846 GO:0022857
Vra6g1004 506 SUPERFAMILY MFS general substrate transporter 7 445 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1004 Vra-Chr6 13083578 13087173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1004 - - gmx:100783378 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1004 6 13083578 13087173 Vra6g1004 6 13083578 13087173 ECH