Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0993 ATGGATGTGAGAATAGGGTTTATGGTGTTTCTGTGTGTTCTTCCAGTGATGGTCTCAGCCATACGCCCTCACCTAACCCCTTTCTATGTCAAGGGTCGTGTGTATTGTGACCCTTGCCGTGCTGGTTTTGAGACACCCCTCACTACCTACATTGCTGGTGCGGAGGTTACTCTGGAATGCAAGGACAGAATCAGAGCTAACATTGTGTACAGCAAGACCGTTAAGACCGATTCCTCAGGATCATATACGATCTTCGTAGACGCGAATCAAGCAAACCAAAATTGTGACGCGAGTCTTGTAACCAGTTCTCTACCTGACTGCAGAGAACCCACTCCAGGGCGTGACCACTCACGTGTTATTCTCAATCGCTACAATGGTATTGCTACCAAGGATAGGTTTGTCAACAACTTGGGTTTCATGAAGCAAAAGGTTGTATCTGCTTGTGCAAAGATTTTCAGGCGATACCGAGATAATGATGATGAGGAGGAGGATTCACTCAATTCTTTGTTTTAG 513 0.4581 MDVRIGFMVFLCVLPVMVSAIRPHLTPFYVKGRVYCDPCRAGFETPLTTYIAGAEVTLECKDRIRANIVYSKTVKTDSSGSYTIFVDANQANQNCDASLVTSSLPDCREPTPGRDHSRVILNRYNGIATKDRFVNNLGFMKQKVVSACAKIFRRYRDNDDEEEDSLNSLF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0993 170 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 6 161 IPR006041 -
Vra6g0993 170 Pfam Pollen protein Ole e 1 like 30 112 - -
Vra6g0993 170 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 6 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0993 Vra-Chr6 12383360 12384324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0993 - - gmx:100796594 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0993 6 12383360 12384324 Vra6g0993 6 12383360 12384324 ECH
Vra6g0993 6 12383360 12384324 Vra5g0908 5 15205646 15207156 PCT