Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0789 ATGGTGTGGGGACTCTTCCCCGTTGATCCTCTTTCAGGTGAAGATAAGTATTATATTTTCAAAACTGGAATTTACAAAGTTGGTCGAAAAGGTTGTGACGTGATAATCGCTAAAGATAAAGGTGTTTCTCGGGTTCATGCAGAAATAGTTGTTAATACGATGAACCTATTAAATCCTTTATCAAATGAATGTTCTCATTTGTCACGCAACATACATATTAGAGATTGCTCCAAGTATGGGACATTTATTAGCAAAAATGTTGGGCCGAAGAAAAAAGTTCATGAGCTACCAAACAAACAAACACCTCTAGAGGATGGTGACTTTGTCTCTTTTGGCACTGGTAGCGCTACCTACAAGTTTTGCCATGTACCCCTCGTTTTTTTCATCTGTTCCTCAAATAAAGTGGATCAATCCATTCAAGAGAAAATTTCATCAATTGGTGCTAGTTTTACTCATACCTTAGGTGAAGGGTGCACACATGTACTGGTAGATCAACTCATGCCGTTGAAGAAGGATCTTGTTGATGCTGTTGTGGCAAAAAAATCTTGTGTTCTTAATAATTGGCTTGAGGTTTTTGCAGAAAAGAATATCAGCATTGAAATTCCTAACTGTCATTCATATATTCCAACAGTGTCAGTGAATGGAGAATCTATAAAAATTGCCGACCCCAGATCACGTGAAGATTGTTTGAAAGGATACACTTTTTTGTTGGAATCTGATCATTTGTATAAATTTCAGGATCAGCTAAAATCTTTATTGGAAGTGGCTGGTGCAAAAGTTGTTTCCTCTGGAGAGTTTTGTTCAAATAGTCAAGATTCAAATTATGGAGAGGATGATCGTGTGGTTTGTGTCATCCCAGAAGGACCAGCATTCAAGTCTAGTCTCTTTGATAAACTGAGTTCCTCGCTTACAGTTAGTGAGATGGATTTAATTTGTGCTGCTCTGAGTGGACAGCTAGATCTGTCTATTTTGAAATCACCATGCATACTTGTTTCGTCGTCATGCTCTACAGATGAGACAATTGTTGCAGATTCAGATACTGAAGTTGAAACAGCCACGTCGGCCCGCTCCACTGAGGCATTCAGCAATGACAATAATGTAAAATATGAAAAAACGGAAGAAATATATGATGATTCTTACGCTTTGGGTAAGAGAAAACATGAGAGTATAGAGGCATCCTCAGATGATGTCTTAACCAAATTGCATGACATTAAACGTGCAAAAACAGAAACATCCGTGGATGGTGCTTCTGTCAGATCACATGCCATCAACTTCGGGAATGATAACGATGGTGTCAAAGTAAAGAAAGACAAGGTTGATGATAATGAACCTGGACATTCAGATGTTGTTTACAGCCAAAATTTAATTGTTCGAGATACAAACATACGGAGTAGCATAAGCACTTCACCAAACAGCAGTTTTCCAAATTTTAAATGTTTCAGAAAGGCACACACTCAGTCTGGTAATAGCTTTGACAATCTTGTTCCATTTGCAAAATATCCATACAAGGATTCTGACTGTGGGGATGATGAAATGTCTGAGTTAGTGAAGGAGGAGAAAAGGCGAAAGAAAATGGAAGCTGTCGCAGATGACCTATTTAATAATGATAAGGCAAGGAAACGAGGCACAGCTGGTTCACGAGGCACTGTTGGTTCTCTTCGTAGCATTCTTTCTTCATGA 1680 0.3857 MVWGLFPVDPLSGEDKYYIFKTGIYKVGRKGCDVIIAKDKGVSRVHAEIVVNTMNLLNPLSNECSHLSRNIHIRDCSKYGTFISKNVGPKKKVHELPNKQTPLEDGDFVSFGTGSATYKFCHVPLVFFICSSNKVDQSIQEKISSIGASFTHTLGEGCTHVLVDQLMPLKKDLVDAVVAKKSCVLNNWLEVFAEKNISIEIPNCHSYIPTVSVNGESIKIADPRSREDCLKGYTFLLESDHLYKFQDQLKSLLEVAGAKVVSSGEFCSNSQDSNYGEDDRVVCVIPEGPAFKSSLFDKLSSSLTVSEMDLICAALSGQLDLSILKSPCILVSSSCSTDETIVADSDTEVETATSARSTEAFSNDNNVKYEKTEEIYDDSYALGKRKHESIEASSDDVLTKLHDIKRAKTETSVDGASVRSHAINFGNDNDGVKVKKDKVDDNEPGHSDVVYSQNLIVRDTNIRSSISTSPNSSFPNFKCFRKAHTQSGNSFDNLVPFAKYPYKDSDCGDDEMSELVKEEKRRKKMEAVADDLFNNDKARKRGTAGSRGTVGSLRSILSS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0789 559 MobiDBLite consensus disorder prediction 532 559 - -
Vra6g0789 559 Gene3D - 4 121 - -
Vra6g0789 559 CDD BRCT 127 190 - -
Vra6g0789 559 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Vra6g0789 559 SUPERFAMILY SMAD/FHA domain 16 128 IPR008984 GO:0005515
Vra6g0789 559 Coils Coil 515 535 - -
Vra6g0789 559 Pfam FHA domain 25 112 IPR000253 GO:0005515
Vra6g0789 559 PANTHER NIBRIN-RELATED 2 537 IPR040227 GO:0006302|GO:0007095|GO:0030870
Vra6g0789 559 Gene3D BRCT domain 122 201 IPR036420 -
Vra6g0789 559 CDD FHA 2 120 IPR000253 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0789 K10867 - gmx:100783205 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0789 6 7734905 7743873 Vra6g0789 6 7734905 7743873 ECH