Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0764 ATGGCTACTGCCACTGAGAAGCTCTCCGCTCTCCAAACTGCCGTCGCCGGACTGAACGAAATCAGTGAGAACGAGAAGAGCGGATTCATCAACCTCGTCACCCGCTATCTCAGTGGCGAGGCGCAGCATGTGGAATGGAGCAAGATCCAGACGCCTACGGACGAAGTGGTTGTGCCTTACGACACTTTGGCGCCAACTCCTGAAGATGCTTCGGAGGTGAAGAATCTATTGGACAAGCTCGTGGTGTTGAAGTTAAATGGAGGCTTGGGAACAACTATGGGCTGCACTGGTCCTAAATCTGTCATTGAAGTTCGTGATGGGTTGACATTTCTAGATTTAATTGTCATCCAAATTGAGAATCTTAATTCCAAATACGGAAGCAATGTTCCTTTGCTTTTGATGAATTCATTCAACACTCATGATGACACTCAAAAGATTATTGAAAAATACCAAAACTCAAATATCGAGATTCATACTTTTAACCAGAGCCAGTATCCTCGAATTGTTGCTGAAGACTTTCTGCCATTGCCTTCCAAAGGGCGCACTGACAAGGACGGATGGTACCCTCCCGGCCATGGTGATGTCTTCCCATCCTTATCTAACAGTGGCAAACTTGATGCACTATTGTCCCAGGGTAAAGAGTATGTATTTGTTGCCAATTCGGATAACTTGGGAGCTATAGTTGACTTGCAAATCTTACATCACTTGGTCCAGAACAAGAATGAATACTGTATGGAGGTGACTCCCAAGACATTGGCTGATGTCAAGGGTGGCACTTTGATTTCTTACGAAGGAAGAGTCCAGCTCCTGGAAATCGCACAAGTCCCAGATGAACATGTCGGTGAATTCAAGTCAATTGAGAAGTTCAAAATTTTCAACACAAATAATTTATGGGTGAACTTAAACGCTGTAAAAAGGCTTGTTGAAGCTGATGCTCTTAAGATGGAAATTATTCCCAATCCAAAGGAAGTCGATGGAATTAAAGTTCTTCAGCTGGAAACTGCAGCTGGTGCTGCCATAAGGTTCTTTGACAAGGCTATTGGTATTAATGTTCCTCGATCACGGTTCCTTCCAGTGAAGGCAACTTCAGATTTACTTCTTGTCCAGTCTGACCTCTACACCTTGGAAAGTGGATTTGTCATTCGGAACAAAGCTAGGACAAATCCTGAAAACCCTTCTATTGAACTGGGACCAGAATTTAAGAAGGTTAGCAACTTCTTGGGCCGCTTCAAGTCAATTCCTAGTATTGTTGAGCTTGACAGTCTTAAAGTGGCTGGCGATGTATGGTTTGGAGCTGGTGTTATCCTCAAGGGAAAAGTGAGTATTGTAGCAAAACCTGATGTAAAGCTGGAAATTCCAGACGGTGCTGTCATTGCGGACAAGGAAATTAACGGCCCAGAGGACCTGTGA 1410 0.4411 MATATEKLSALQTAVAGLNEISENEKSGFINLVTRYLSGEAQHVEWSKIQTPTDEVVVPYDTLAPTPEDASEVKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNSKYGSNVPLLLMNSFNTHDDTQKIIEKYQNSNIEIHTFNQSQYPRIVAEDFLPLPSKGRTDKDGWYPPGHGDVFPSLSNSGKLDALLSQGKEYVFVANSDNLGAIVDLQILHHLVQNKNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVGEFKSIEKFKIFNTNNLWVNLNAVKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDKAIGINVPRSRFLPVKATSDLLLVQSDLYTLESGFVIRNKARTNPENPSIELGPEFKKVSNFLGRFKSIPSIVELDSLKVAGDVWFGAGVILKGKVSIVAKPDVKLEIPDGAVIADKEINGPEDL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0764 469 PANTHER - 1 469 IPR016267 GO:0003983|GO:0006011
Vra6g0764 469 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 469 - -
Vra6g0764 469 CDD UGPase_euk 86 375 IPR016267 GO:0003983|GO:0006011
Vra6g0764 469 Gene3D Hexapeptide repeat proteins 360 469 - -
Vra6g0764 469 Pfam UTP--glucose-1-phosphate uridylyltransferase 28 437 IPR002618 GO:0070569
Vra6g0764 469 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 359 IPR029044 -
Vra6g0764 469 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 446 IPR029044 -
Vra6g0764 469 PIRSF UDPGP 1 469 IPR016267 GO:0003983|GO:0006011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0764 Vra-Chr6 7422046 7428944 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0764 K00963 - gmx:100790112 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0764 6 7422046 7428944 Vra6g0764 6 7422046 7428944 ECH